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Sox17和Erg在重编程成纤维细胞过程中协同激活内皮细胞命运。

Sox17 and Erg synergistically activate endothelial cell fate in reprogramming fibroblasts.

作者信息

Farber Gregory, Takasugi Paige, Ricketts Shea, Wang Haofei, Xie Yifang, Farber Esther, Liu Jiandong, Qian Li

机构信息

The McAllister Heart Institute, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.

The McAllister Heart Institute, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA; Department of Pathology and Laboratory Medicine, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.

出版信息

J Mol Cell Cardiol. 2025 Feb;199:33-45. doi: 10.1016/j.yjmcc.2024.11.012. Epub 2024 Dec 16.

DOI:10.1016/j.yjmcc.2024.11.012
PMID:39689498
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11883746/
Abstract

Sox17-Erg direct reprogramming is a potent tool for the in vitro and in vivo generation of arterial-like induced-endothelial cells from fibroblasts. In this study, we illustrate the pioneering roles of both Sox17 and Erg in the endothelial cell reprogramming process and demonstrate that emergent gene expression only occurs when both factors are co-expressed. Bioinformatic analyses and molecular validation reveal both Bach2 and Etv4 as integral mediators of Sox17-Erg reprogramming with different roles in lung and heart fibroblast reprogramming. The generated organ-specific induced endothelial cells express molecular signatures similar to vasculature found in the starting cell's organ of origin and the starting chromatin architecture plays a role in the acquisition of this organ-specific identity. Overall, the Sox17-Erg reprogramming mechanism provides foundational knowledge for the future recapitulation of vascular heterogeneity through direct reprogramming.

摘要

Sox17-Erg直接重编程是一种用于在体外和体内从成纤维细胞生成动脉样诱导内皮细胞的有效工具。在本研究中,我们阐述了Sox17和Erg在内皮细胞重编程过程中的先驱作用,并证明只有当这两种因子共同表达时才会出现新的基因表达。生物信息学分析和分子验证揭示了Bach2和Etv4作为Sox17-Erg重编程的重要介导因子,在肺和心脏成纤维细胞重编程中发挥不同作用。所生成的器官特异性诱导内皮细胞表达的分子特征类似于起始细胞起源器官中发现的脉管系统,并且起始染色质结构在获得这种器官特异性身份中发挥作用。总体而言,Sox17-Erg重编程机制为未来通过直接重编程再现血管异质性提供了基础知识。

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2
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本文引用的文献

1
Direct conversion of cardiac fibroblasts into endothelial-like cells using Sox17 and Erg.利用 Sox17 和 Erg 将心脏成纤维细胞直接转化为内皮样细胞。
Nat Commun. 2024 May 16;15(1):4170. doi: 10.1038/s41467-024-48354-6.
2
Direct programming of human pluripotent stem cells into endothelial progenitors with SOX17 and FGF2.SOX17 和 FGF2 直接将人多能干细胞编程为内皮祖细胞。
Stem Cell Reports. 2024 Apr 9;19(4):579-595. doi: 10.1016/j.stemcr.2024.02.006. Epub 2024 Mar 21.
3
Dictionary learning for integrative, multimodal and scalable single-cell analysis.基于字典学习的综合、多模态和可扩展的单细胞分析。
Nat Biotechnol. 2024 Feb;42(2):293-304. doi: 10.1038/s41587-023-01767-y. Epub 2023 May 25.
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Dissecting cell identity via network inference and in silico gene perturbation.通过网络推断和计算机基因扰动解析细胞身份。
Nature. 2023 Feb;614(7949):742-751. doi: 10.1038/s41586-022-05688-9. Epub 2023 Feb 8.
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Vascular endothelial cell development and diversity.血管内皮细胞的发育与多样性。
Nat Rev Cardiol. 2023 Mar;20(3):197-210. doi: 10.1038/s41569-022-00770-1. Epub 2022 Oct 5.
6
ETV2 functions as a pioneer factor to regulate and reprogram the endothelial lineage.ETV2作为先驱因子发挥作用,以调节和重编程内皮谱系。
Nat Cell Biol. 2022 May;24(5):672-684. doi: 10.1038/s41556-022-00901-3. Epub 2022 May 12.
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Single-cell chromatin state analysis with Signac.使用 Signac 进行单细胞染色质状态分析。
Nat Methods. 2021 Nov;18(11):1333-1341. doi: 10.1038/s41592-021-01282-5. Epub 2021 Nov 1.
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clusterProfiler 4.0: A universal enrichment tool for interpreting omics data.clusterProfiler 4.0:用于解释组学数据的通用富集工具。
Innovation (Camb). 2021 Jul 1;2(3):100141. doi: 10.1016/j.xinn.2021.100141. eCollection 2021 Aug 28.
9
ETS1, ELK1, and ETV4 Transcription Factors Regulate Angiopoietin-1 Signaling and the Angiogenic Response in Endothelial Cells.ETS1、ELK1和ETV4转录因子调控血管生成素-1信号通路及内皮细胞的血管生成反应。
Front Physiol. 2021 Jul 26;12:683651. doi: 10.3389/fphys.2021.683651. eCollection 2021.
10
Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo.肺谱系转录因子NKX2-1的差异性染色质结合在体内决定了小鼠肺泡细胞的相反命运。
Nat Commun. 2021 May 4;12(1):2509. doi: 10.1038/s41467-021-22817-6.