Brown Ty J, Pichurin Jennifer, Parrado Carlos Ramirez, Kabeche Lilian, Baserga Susan J
Department of Genetics, Yale University and the Yale School of Medicine, New Haven, 06520 CT.
Department of Molecular Biophysics and Biochemistry, Yale University and the Yale School of Medicine, New Haven, 06520 CT.
Mol Biol Cell. 2025 Feb 1;36(2):ar16. doi: 10.1091/mbc.E24-08-0337. Epub 2024 Dec 20.
Ribosome biogenesis (RB) is an intricate and evolutionarily conserved process that takes place mainly in the nucleolus and is required for eukaryotic cells to maintain homeostasis, grow in size, and divide. Our laboratory has identified the NUF2 protein, part of the mitotic kinetochore, in a genome-wide siRNA screen for proteins required for making ribosomes in MCF10A human breast epithelial cells. After rigorous validation and using several biochemical and cell-based assays, we find a role for NUF2 in pre-rRNA transcription, the primary and rate-limiting step of RB. siRNA depletion of other components of the NUF2 kinetochore sub-complex, NDC80, SPC24, and SPC25, also reduce pre-rRNA transcription. Interestingly, essential protein components for pre-rRNA transcription, including the largest subunit of RNA polymerase I, POLR1A, are reduced upon siRNA depletion of NUF2 and its protein partners. Their reduced levels are a likely mechanism for the decrease in pre-rRNA transcription. siRNA depletion of NUF2 and NDC80 also cause increased TP53 and (p21) mRNA levels, which can be restored by codepletion of RPL5, indicating activation of the nucleolar stress pathway (NSP). These results reveal a new connection between proteins with a known role in mitosis to the function of the nucleolus in RB during interphase.
核糖体生物合成(RB)是一个复杂且在进化上保守的过程,主要发生在核仁中,是真核细胞维持稳态、生长和分裂所必需的。我们实验室在全基因组siRNA筛选中,于MCF10A人乳腺上皮细胞中鉴定出有丝分裂动粒的一部分——NUF2蛋白,该筛选针对制造核糖体所需的蛋白质。经过严格验证并使用多种生化和基于细胞的检测方法后,我们发现NUF2在rRNA前体转录(RB的主要且限速步骤)中发挥作用。对NUF2动粒亚复合体的其他组分NDC80、SPC24和SPC25进行siRNA敲减,也会降低rRNA前体转录。有趣的是,在对NUF2及其蛋白伙伴进行siRNA敲减后,rRNA前体转录的必需蛋白组分,包括RNA聚合酶I的最大亚基POLR1A,水平降低。它们水平的降低可能是rRNA前体转录减少的一种机制。对NUF2和NDC80进行siRNA敲减还会导致TP53和(p21)mRNA水平升高,而通过共敲减RPL5可使其恢复,这表明核仁应激途径(NSP)被激活。这些结果揭示了在有丝分裂中具有已知作用的蛋白质与间期RB中核仁功能之间的新联系。