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用于分析碳水化合物依赖性相互作用的光交联与捕获

Photocrosslinking and capture for the analysis of carbohydrate-dependent interactions.

作者信息

Pratt Matthew R

机构信息

Department of Chemistry, University of Southern California, Los Angeles, CA 90089, USA.

出版信息

Bioorg Med Chem Lett. 2025 Mar 1;117:130077. doi: 10.1016/j.bmcl.2024.130077. Epub 2024 Dec 20.

Abstract

Carbohydrates play crucial roles in biological systems, including by mediating cell and protein interactions. The complexity and transient nature of carbohydrate-dependent interactions pose significant challenges for their characterization, as traditional techniques often fail to capture these low-affinity binding events. This review highlights the increasing utility of photocrosslinkers in studying carbohydrate-mediated interactions. Photocrosslinkers, such as aryl azides, benzophenones, and diazirines, allow for the capture of fleeting interactions by forming covalent bonds upon UV irradiation, enabling the downstream application of standard biochemical techniques. I discuss the three primary strategies for incorporating photocrosslinkers: synthetic small molecules, metabolic labeling, and exo-enzymatic labeling. I predict that the continued development and application of these methodologies will enhance our understanding of glycan-mediated interactions and their implications in health and disease.

摘要

碳水化合物在生物系统中发挥着关键作用,包括介导细胞与蛋白质的相互作用。依赖碳水化合物的相互作用具有复杂性和短暂性,这给其表征带来了重大挑战,因为传统技术往往无法捕捉到这些低亲和力的结合事件。本综述强调了光交联剂在研究碳水化合物介导的相互作用中日益增加的效用。光交联剂,如芳基叠氮化物、二苯甲酮和重氮烷烃,能够通过在紫外线照射下形成共价键来捕捉短暂的相互作用,从而使标准生化技术得以进行下游应用。我讨论了纳入光交联剂的三种主要策略:合成小分子、代谢标记和外切酶标记。我预测,这些方法的持续发展和应用将增进我们对聚糖介导的相互作用及其在健康和疾病中的意义的理解。

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