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一种深海细胞色素P450 51的独特结构特征与高压适应性有关。

Unique structural features in a deep-sea CYP51 relate to high pressure adaptation.

作者信息

Hargrove Tatiana Y, Lamb David C, Wawrzak Zdzislaw, Minasov George, Goldstone Jared V, Kelly Steven L, Stegeman John, Lepesheva Galina I

机构信息

Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.

Faculty of Medicine, Health and Life Science, Swansea University, Swansea, SA2 8PP, UK.

出版信息

Res Sq. 2024 Dec 12:rs.3.rs-5589110. doi: 10.21203/rs.3.rs-5589110/v1.

Abstract

Cytochromes P450 (CYP) form one of the largest enzyme superfamilies on Earth, with similar structural fold but biological functions varying from synthesis of physiologically essential compounds to metabolism of myriad xenobiotics. Here we determined the crystal structures of and human sterol 14α-demethylases (CYP51s). Both structures reveal elements that imply elevated conformational flexibility, uncovering molecular basis for faster catalytic rates, lower substrate selectivity, and resistance to inhibition. These elements as well as the unique inward/outward location of the FG arm/β4 hairpin in the fish CYP51 structure were not predicted by artificial intelligence molecular modelling. The structural distinction of CYP51, which is the first structurally characterized deep-sea P450, suggests stronger involvement of the membrane environment in regulation of this enzyme function. We interpret this as a co-adaptation of membrane protein structure with changes in membrane lipid composition during evolutionary incursion to life in the deep sea.

摘要

细胞色素P450(CYP)是地球上最大的酶超家族之一,具有相似的结构折叠,但生物学功能从生理必需化合物的合成到无数异源生物的代谢各不相同。在这里,我们确定了[具体物种]和人类固醇14α-脱甲基酶(CYP51s)的晶体结构。两种结构都揭示了暗示构象灵活性增加的元素,揭示了催化速率更快、底物选择性更低和抗抑制性的分子基础。这些元素以及鱼类CYP51结构中FG臂/β4发夹独特的向内/向外位置并未被人工智能分子建模预测到。[具体物种]CYP51是首个在结构上得到表征的深海P450,其结构差异表明膜环境在该酶功能调节中发挥更强的作用。我们将此解释为在向深海生命进化入侵过程中,膜蛋白结构与膜脂质组成变化的共同适应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc17/11661291/ca3fdc26bdcc/nihpp-rs5589110v1-f0001.jpg

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