Hernández-García Marta, Barbero-Herranz Raquel, Bastón-Paz Natalia, Díez-Aguilar María, López-Collazo Eduardo, Márquez-Garrido Francesc J, Hernández-Pérez José María, Baquero Fernando, Ekkelenkamp Miquel B, Fluit Ad C, Fuentes-Valverde Víctor, Moscoso Miriam, Bou Germán, Del Campo Rosa, Cantón Rafael, Avendaño-Ortiz José
Servicio de Microbiología, Hospital Universitario Ramón y Cajal, Instituto Ramón y Cajal de Investigación Sanitaria (IRYCIS), Madrid, Spain.
CIBER de Enfermedades Infecciosas, Instituto de Salud Carlos III, Madrid, Spain.
Front Cell Infect Microbiol. 2024 Dec 6;14:1446626. doi: 10.3389/fcimb.2024.1446626. eCollection 2024.
Murepavadin is an antimicrobial peptide (AMP) in clinical development that selectively targets LptD and whose resistance profile remains unknown. We aimed to explore genomic modifications and consequences underlying murepavadin and/or colistin susceptibility.
To define genomic mechanisms underlying resistance, we performed two approaches: 1) a genome-wide association study (GWAS) in a clinical collection (n=496), considering >0.25 mg/L as tentative cut-off of murepavadin acquired resistance; 2) a paired genomic comparison in a subset of 5 isolates and their isogenic murepavadin-resistant mutants obtained . Lipid-A composition, immunogenicity and cathelicidin and indolicidin effects on bacterial growth were also tested in this last subset of isolates. Murepavadin MICs were determined in Δ and Δ knock-out mutants obtained from a auxotroph PAO1 derivative.
GWAS revealed a missense variant (A→G p.Thr260Ala in the gene) associated with murepavadin resistance although both resistant and susceptible strains harbored it (21% and 12% respectively, OR=1.92, p=0.012 in χ² test). Among the isolate subset, murepavadin-resistant mutants with deletions in and genes showed lower abundance of hexa-acylated lipid-A (m/z 1616, 1632). 4-aminoarabinose addition was found only in colistin-resistant isolates but not in the other ones, irrespective of murepavadin susceptibility. Accordingly, Δ and Δ mutants exhibited higher murepavadin MICs than parental PAO1 auxotroph strain (2 and 4 0.5 mg/L respectively). Lipopolysaccharide from murepavadin-resistant mutants triggered lower inflammatory responses in human monocytes. Those with mutations and hexa-acylated lipid-A loss also exhibited greater growth reduction when exposed to host-derived AMPs cathelicidin and indolicidin.
High murepavadin-resistance seems to be linked to and mutations and lower hexa-acylated lipid-A, corresponding to lower inflammatory induction and higher susceptibility to host-derived AMPs. Although GWAS identified one variant associated with the murepavadin-resistant phenotype, data revealed that there was no unique single genetic event underlying this phenotype. Our study provides insight into the mechanisms underlying murepavadin susceptibility.
穆雷帕瓦定是一种处于临床开发阶段的抗菌肽(AMP),它选择性靶向LptD,其耐药谱尚不清楚。我们旨在探索穆雷帕瓦定和/或黏菌素敏感性的基因组修饰及其后果。
为了确定耐药的基因组机制,我们采用了两种方法:1)在一个临床样本集(n = 496)中进行全基因组关联研究(GWAS),将>0.25 mg/L视为穆雷帕瓦定获得性耐药的暂定临界值;2)在5株分离株及其同源的穆雷帕瓦定耐药突变体的子集中进行配对基因组比较。在这最后一组分离株中还测试了脂多糖A的组成、免疫原性以及杀菌肽和吲哚杀菌素对细菌生长的影响。在从营养缺陷型PAO1衍生物获得的Δ和Δ敲除突变体中测定了穆雷帕瓦定的最低抑菌浓度(MIC)。
GWAS揭示了一个错义变体(基因中A→G p.Thr260Ala)与穆雷帕瓦定耐药相关,尽管耐药菌株和敏感菌株都携带该变体(分别为21%和12%,χ²检验中OR = 1.92,p = 0.012)。在分离株子集中,在和基因中存在缺失的穆雷帕瓦定耐药突变体显示六酰化脂多糖A(m/z 1616、1632)丰度较低。仅在耐黏菌素的分离株中发现了4-氨基阿拉伯糖的添加,而在其他分离株中未发现,无论其对穆雷帕瓦定的敏感性如何。因此,Δ和Δ突变体的穆雷帕瓦定MIC高于亲本PAO1营养缺陷型菌株(分别为2和4 0.5 mg/L)。来自穆雷帕瓦定耐药突变体的脂多糖在人单核细胞中引发的炎症反应较低。那些具有突变和六酰化脂多糖A缺失的菌株在暴露于宿主来源的杀菌肽和吲哚杀菌素时也表现出更大的生长抑制。
高穆雷帕瓦定耐药性似乎与和突变以及较低的六酰化脂多糖A有关,这对应着较低的炎症诱导和对宿主来源杀菌肽的更高敏感性。尽管GWAS鉴定出一个与穆雷帕瓦定耐药表型相关的变体,但数据表明该表型背后不存在单一独特的遗传事件。我们的研究深入了解了穆雷帕瓦定敏感性的潜在机制。