Arias-Flórez Juan Sebastian, Ramirez Sandra Ximena, Bayona-Gomez Bibiana, Castro-Castillo Lina, Correa-Martinez Valeria, Sanchez-Gomez Yasmín, Usaquén-Martínez William, Casas-Vargas Lilian Andrea, Olmos Olmos Carlos Eduardo, Contreras Bravo Nora, Velandia-Piedrahita Camilo Andres, Morel Adrien, Cabrera-Perez Rodrigo, Santiago-Tovar Natalia, Gaviria-Sabogal Cristian Camilo, Bernal Ingrid Tatyana, Fonseca-Mendoza Dora Janeth, Restrepo Carlos M
Department of Morphology, Institute of Human Genetics, Grupo Investigación Genética Clínica UNAL, Universidad Nacional de Colombia, Bogotá D.C., Colombia.
Department of Internal Medicine, Hospital Universitario Mayor-Mederi, Universidad del Rosario, Bogotá D.C, Colombia.
PLoS One. 2024 Dec 26;19(12):e0311316. doi: 10.1371/journal.pone.0311316. eCollection 2024.
Hereditary angioedema type 1 (HAE1) is a rare, genetically heterogeneous, and autosomal dominant disease. It is a highly variable, insidious, and potentially life-threatening condition, characterized by sudden local, often asymmetric, and episodic subcutaneous and submucosal swelling, caused by pathogenic molecular variants in the SERPING1 gene, which codes for C1-Inhibitor protein. This study performed the phenotypic and molecular characterization of a HAE1 cluster that includes the largest number of affected worldwide. A geographically HAE1 cluster was found in the northeast Colombian department of Boyaca, which accounts for four unrelated families, with 79 suspected to be affected members. Next-Generation Sequencing (NGS) was performed in 2 out of 4 families (Family 1 and Family 4), identifying the variants c.1420C>T and c.1238T>G, respectively. The latter corresponds to a novel mutation. For Families 2 and 3, the c.1417G>A variant was confirmed by Sanger sequencing. This variant had been previously reported to the patient prior to the beginning of this study. Using deep-learning methods, the structure of the C1-Inhibitor protein, p.Gln474* and p.Met413Arg was predicted, and we propose the molecular mechanism related to the etiology of the disease. Using Sanger sequencing, family segregation analysis was performed on 44 individuals belonging to the families analyzed. The identification of this cluster and its molecular analysis will allow the timely identification of new cases and the establishment of adequate treatment strategies. Our results establish the importance of performing population genetic studies in a multi-cluster region for genetic diseases.
1型遗传性血管性水肿(HAE1)是一种罕见的、遗传异质性的常染色体显性疾病。它是一种高度可变、隐匿且可能危及生命的病症,其特征为突然出现局部、通常不对称且发作性的皮下和黏膜下肿胀,由编码C1抑制蛋白的SERPING1基因中的致病分子变异引起。本研究对一个HAE1聚集群体进行了表型和分子特征分析,该群体是全球范围内受影响人数最多的。在哥伦比亚东北部的博亚卡省发现了一个地理上的HAE1聚集群体,其中包括四个无亲缘关系的家族,有79名疑似受影响成员。对4个家族中的2个(家族1和家族4)进行了二代测序(NGS),分别鉴定出变异c.1420C>T和c.1238T>G。后者对应一种新的突变。对于家族2和家族3,通过桑格测序确认了c.1417G>A变异。在本研究开始之前,该变异已报告给患者。使用深度学习方法,预测了C1抑制蛋白p.Gln474*和p.Met413Arg的结构,并提出了与该疾病病因相关的分子机制。使用桑格测序对所分析家族的44名个体进行了家系分离分析。该聚集群体的鉴定及其分子分析将有助于及时识别新病例并制定适当的治疗策略。我们的结果确立了在多聚集区域对遗传疾病进行群体遗传学研究的重要性。