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一种针对耐甲氧西林金黄色葡萄球菌(MRSA)且具有高稳定性的新型嵌合溶菌酶的表征及生物信息学分析

Characterization and bioinformatic analysis of a new chimeric endolysin against MRSA with great stability.

作者信息

Momen Sanaz, Soleimani Neda, Azizmohseni Farzaneh, Ahmadbeigi Yasaman, Borhani Seddigheh, Amini-Bayat Zahra

机构信息

Department of Microbiology and Microbial Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran.

Department of Biotechnology, Iranian Research Organization for Science and Technology (IROST), Tehran, Iran.

出版信息

AMB Express. 2024 Dec 26;14(1):143. doi: 10.1186/s13568-024-01812-2.

Abstract

Antibiotics become less effective in treating infectious diseases as resistance increases. Staphylococcus aureus is a global problem due to its ability to form biofilms and resistance mechanisms. Phage endolysin is one of the most promising methods for combating antibiotic resistance. ZAM-MSC chimeric endolysin has three domains derived from SAL1 and lysostaphin, which target the peptide bridge of peptidoglycan. In this study purified ZAM-MSC (with yield of 30 mg/lit) had bactericidal activity against methicillin-sensitive Staphylococcus aureus (MSSA) and methicillin-resistant Staphylococcus aureus (MRSA) at low concentrations (2.38 μg/ml and 1.88 μg/ml, respectively). The antibacterial spectrum revealed that ZAM-MSC was active against diverse Staphylococci. it has maintained 100% stability after 24 h incubation in pH 5 to 10 against S. aureus, as well as demonstrated significant thermostability and maintained nearly its full activity at different temperatures (4-42 °C) up to 1 day of incubation. The anti-biofilm activity of various concentrations of ZAM-MSC against MSSA and MRSA biofilms was not dose-dependent, and antibiofilm activity was observed even at low concentrations (14 μg/ml). Further, the molecular dynamics simulations demonstrated that the ZAM-MSC chimer and its parent proteins remained dynamically stable, showing similar flexibility despite the size and hydrogen bond number differences. In conclusion, the study reveals that chimeric ZAM-MSC is a distinctive enzyme with exceptional biochemical properties and rapid lytic activity against Staphylococci.

摘要

随着耐药性增加,抗生素在治疗传染病方面的效果越来越差。金黄色葡萄球菌因其形成生物膜的能力和耐药机制而成为一个全球性问题。噬菌体溶菌酶是对抗抗生素耐药性最有前景的方法之一。ZAM-MSC嵌合溶菌酶有三个结构域,分别来源于SAL1和溶葡萄球菌素,它们靶向肽聚糖的肽桥。在本研究中,纯化后的ZAM-MSC(产量为30mg/升)在低浓度(分别为2.38μg/ml和1.88μg/ml)下对甲氧西林敏感金黄色葡萄球菌(MSSA)和耐甲氧西林金黄色葡萄球菌(MRSA)具有杀菌活性。抗菌谱显示ZAM-MSC对多种葡萄球菌具有活性。在pH值为5至10的条件下与金黄色葡萄球菌孵育24小时后,它保持了100%的稳定性,并且表现出显著的热稳定性,在不同温度(4-42°C)下孵育长达1天仍保持几乎全部活性。不同浓度的ZAM-MSC对MSSA和MRSA生物膜的抗生物膜活性不呈剂量依赖性,即使在低浓度(14μg/ml)下也观察到了抗生物膜活性。此外,分子动力学模拟表明,ZAM-MSC嵌合体及其亲本蛋白保持动态稳定,尽管大小和氢键数量存在差异,但仍表现出相似的灵活性。总之,该研究表明嵌合ZAM-MSC是一种独特的酶,具有特殊的生化特性和对葡萄球菌的快速裂解活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc11/11671461/658f13ad34cd/13568_2024_1812_Fig1_HTML.jpg

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