Kuang Lin, Wang Xiaowei, He Zimeng, Zhang Yue, Luo Jiaqing, Zhang Wei, Fu Zhengjiang, Tuo Xun
School of Pharmacy, Nanchang University, Nanchang 330031, Jiangxi, China.
School of Chemistry and Chemical Engineering, Nanchang University, Nanchang 330031, Jiangxi, China.
Int J Biol Macromol. 2025 Mar;293:139266. doi: 10.1016/j.ijbiomac.2024.139266. Epub 2024 Dec 27.
N-(1,3-dimethylbutyl)-N'-phenyl-p-phenylenediamine-quinone (6PPD-Q), an oxidative derivative of tire anti-degradant, has been linked to mortality in coho salmon (Oncorhynchus kisutch) and has exhibited potential human toxicity. Hence, exploring how 6PPD-Q interacts with biomacromolecules like enzymes is indispensable to assess its human toxicity and elucidate its mechanism of action. This investigation aims to explore the impact of 6PPD-Q on lactate dehydrogenase (LDH) through various methods. The findings indicate that 6PPD-Q can spontaneously embed in the coenzyme site of LDH and obviously change the biological activity of LDH by non-competitive inhibition. Simultaneously, this inhibitory effect is concentration-dependent. 6PPD-Q can affect both the level of LDH and the transcription of Ldha in AML-12 cells. Hydrogen bonding and van der Waals forces serve as the primary driving forces in LDH-6PPD-Q combination process. The apparent binding constant (K) value is (9.773 ± 0.699) × 10 L/mol (298 K). The presence of 6PPD-Q alters the conformation of LDH and decreases its structural stability. Moreover, the results of molecular docking indicate that the interaction of 6PPD-Q with Asp51 and Arg98 of LDH may be the reason that 6PPD-Q inhibits the biological activity of LDH. Meanwhile, the energy decomposition of residue analyses for LDH-6PPD-Q formation further highlight the energy contribution of Asp51 and Arg98 in this combination process.
N-(1,3-二甲基丁基)-N'-苯基-对苯二胺醌(6PPD-Q)是一种轮胎抗降解剂的氧化衍生物,与银大麻哈鱼(Oncorhynchus kisutch)的死亡率有关,并已显示出潜在的人体毒性。因此,探索6PPD-Q如何与酶等生物大分子相互作用对于评估其人体毒性和阐明其作用机制是必不可少的。本研究旨在通过各种方法探索6PPD-Q对乳酸脱氢酶(LDH)的影响。研究结果表明,6PPD-Q可以自发嵌入LDH的辅酶位点,并通过非竞争性抑制明显改变LDH的生物活性。同时,这种抑制作用具有浓度依赖性。6PPD-Q可以影响AML-12细胞中LDH的水平和Ldha的转录。氢键和范德华力是LDH-6PPD-Q结合过程中的主要驱动力。表观结合常数(K)值为(9.773±0.699)×10 L/mol(298 K)。6PPD-Q的存在改变了LDH的构象并降低了其结构稳定性。此外,分子对接结果表明,6PPD-Q与LDH的Asp51和Arg98的相互作用可能是6PPD-Q抑制LDH生物活性的原因。同时,LDH-6PPD-Q形成的残基能量分解分析进一步突出了Asp51和Arg98在该结合过程中的能量贡献