Mellor Desirae A, Suo Yixing, Miyada Matthew G, Medina Perez Grace A, Burkart Michael D
Department of Chemistry and Biochemistry, University of California San Diego, 9500 Gilman Drive, La Jolla, California 92093-0358, United States.
Biochemistry. 2025 Jan 21;64(2):351-356. doi: 10.1021/acs.biochem.4c00569. Epub 2024 Dec 31.
(Mtb) is a leading cause of death, with an escalating global occurrence of drug-resistant infections that are partially attributed to cell wall mycolic acids derived from type II fatty acid biosynthesis (FAS-II). Here, the central acyl carrier protein, AcpM, contributes to the regulation of complex and specific protein-protein interactions (PPIs), though the orchestration of these events remain largely unresolved due to unique features of AcpM. Limitations include complexities in generating modified AcpM in a single state. Herein, we report a streamlined method to generate homogeneous samples of modified AcpM for applications in structure and functional studies. We apply these to generate solvatochromic labeled -AcpM, where fluorescence response reports cargo sequestration and chain flipping upon interaction with four FAS-II enzymes. We find an increased fluorescence in a truncated form, AcpM80, indicating that the 35-residue C-terminus is involved in modulating the chemical environment surrounding the substrate and contributing to the regulation of PPIs. This study establishes an efficient chemo-enzymatic strategy to generate AcpM analogs for biophysical studies to aid in understanding the processes driving Mtb pathogenicity and drug resistance.
结核分枝杆菌(Mtb)是主要的死亡原因,全球耐药感染发生率不断上升,部分原因是源自II型脂肪酸生物合成(FAS-II)的细胞壁分枝菌酸。在这里,核心酰基载体蛋白AcpM有助于调节复杂且特定的蛋白质-蛋白质相互作用(PPI),不过由于AcpM的独特特性,这些事件的协调机制在很大程度上仍未得到解决。限制因素包括以单一状态生成修饰后的AcpM存在复杂性。在此,我们报告一种简化方法,用于生成修饰后AcpM的均匀样本,以用于结构和功能研究。我们应用这些方法生成溶剂化显色标记的AcpM,其中荧光响应报告了与四种FAS-II酶相互作用时的货物隔离和链翻转。我们发现截短形式的AcpM80荧光增强,表明35个残基的C末端参与调节底物周围的化学环境并有助于PPI的调节。本研究建立了一种有效的化学酶策略,用于生成用于生物物理研究的AcpM类似物,以帮助理解驱动Mtb致病性和耐药性的过程。