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哮喘中的拷贝数变异:一项综合综述。

Copy Number Variation in Asthma: An Integrative Review.

作者信息

Garcia Fernanda Mariano, de Sousa Valdemir Pereira, Silva-Dos-Santos Priscila Pinto E, Fernandes Izadora Silveira, Serpa Faradiba Sarquis, de Paula Flávia, Mill José Geraldo, Bueno Maria Rita Passos, Errera Flávia Imbroisi Valle

机构信息

Postgraduate Program in Biochemistry, Federal University of Espírito Santo (UFES), Vitória, Espírito Santo, Brazil.

Postgraduate Program in Biotechnology, Federal University of Espírito Santo (UFES), Vitória, Espírito Santo, Brazil.

出版信息

Clin Rev Allergy Immunol. 2025 Jan 4;68(1):4. doi: 10.1007/s12016-024-09015-0.

Abstract

Asthma is a complex disease with varied clinical manifestations resulting from the interaction between environmental and genetic factors. While chronic airway inflammation and hyperresponsiveness are central features, the etiology of asthma is multifaceted, leading to a diversity of phenotypes and endotypes. Although most research into the genetics of asthma focused on the analysis of single nucleotide polymorphisms (SNPs), studies highlight the importance of structural variations, such as copy number variations (CNVs), in the inheritance of complex characteristics, but their role has not yet been fully elucidated in asthma. In this context, an integrative review was conducted to identify the genes and pathways involved, the location, size, and classes of CNVs, as well as their contribution to asthma risk, severity, control, and response to treatment. As a result of the review, 16 articles were analyzed, from different types of observational studies, such as case-control, cohort studies and genotyped-proband or trios design, that have been carried out in populations from different countries, ethnicities, and ages. Chromosomes 12 and 17 were the most studied in three publications each. CNVs located on 12 chromosomes were associated with asthma, the majority being found on chromosome 6p and 17q, of the deletion type, encompassing 30 different coding-protein genes and one pseudogene region. Six genes with CNVs were identified as significant expression quantitative locus (eQTLs) with mean expression in asthma-related tissues, such as the lung and whole blood. The phenotypic variability of asthma may hinder the clinical application of these findings, but the research shows the importance of investigating these genetic variations as possible biomarkers in asthma patients.

摘要

哮喘是一种复杂的疾病,由环境和遗传因素相互作用导致多种临床表现。虽然慢性气道炎症和高反应性是其核心特征,但哮喘的病因是多方面的,导致了多种表型和内型。尽管大多数哮喘遗传学研究集中在单核苷酸多态性(SNP)分析上,但研究强调了结构变异(如拷贝数变异,CNV)在复杂性状遗传中的重要性,但其在哮喘中的作用尚未完全阐明。在此背景下,进行了一项综合综述,以确定涉及的基因和途径、CNV的位置、大小和类别,以及它们对哮喘风险、严重程度、控制和治疗反应的影响。综述结果分析了16篇文章,这些文章来自不同类型的观察性研究,如病例对照研究、队列研究以及在不同国家、种族和年龄人群中开展的基因分型先证者或三联体设计研究。在三篇文章中,12号和17号染色体研究最多。位于12条染色体上的CNV与哮喘相关,大多数位于6p和17q染色体上,为缺失型,包含30个不同的编码蛋白基因和一个假基因区域。六个具有CNV的基因被确定为显著表达数量性状位点(eQTL),在哮喘相关组织(如肺和全血)中具有平均表达。哮喘的表型变异性可能会阻碍这些研究结果的临床应用,但该研究表明,在哮喘患者中研究这些基因变异作为可能的生物标志物具有重要意义。

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