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Identification of as a Potential Biomarker for Progression from Barrett's Esophagus to Esophageal Adenocarcinoma: A Comprehensive Bioinformatic Analysis.

作者信息

Qureshi Sajida, Abbasi Waqas Ahmad, Qureshi Muhammad Asif, Jalil Hira Abdul, Quraishy Muhammad Saeed

机构信息

Dow Medical College, Dow University of Health Sciences, Karachi 74200, Pakistan.

出版信息

Diagnostics (Basel). 2024 Dec 19;14(24):2863. doi: 10.3390/diagnostics14242863.


DOI:10.3390/diagnostics14242863
PMID:39767224
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11675858/
Abstract

: Barrett's esophagus (BE), with metaplastic columnar epithelium in the lower esophagus, predisposes patients to esophageal adenocarcinoma (EAC). Despite extensive research, mechanisms underlying BE progression to EAC remain unclear, and no validated biomarkers are available for clinical use. Progastricsin/Pepsinogen-C (PGC), an aspartic proteinase linked to maintaining normal epithelial morphology, is often absent in advanced gastrointestinal malignancies. This study comprehensively investigates PGC expression across cancers, particularly in esophageal cancer (ESCA), to clarify its role in BE progression to EAC. : We utilized multiple bioinformatic platforms (TIMER, UALCAN, cBioPortal, GEPIA, STRING, Metascape, and GEO database) to assess expression, genomic alterations, and correlations with clinicopathological features, survival, and immune infiltration. Additionally, using the GEO dataset, we compared non-dysplastic Barrett's esophagus (NDBE) patients with those who progressed to malignancy, identifying differentially expressed genes (DEGs), their interactions, and potential roles in progression. : was notably upregulated in various cancers, especially in adjacent normal tissues of ESCA. Genomic amplifications of were linked to improved survival in EAC patients, particularly those with high expression, suggesting a protective role. Moreover, expression positively correlated with favorable immune infiltration, notably B cells and CD8+ T cells. Enrichment analysis of downregulated DEGs revealed significant involvement in key biological processes, specifically in extracellular matrix organization. Among the downregulated DEGs, we identified among the top 10 hub genes, underscoring its role in tissue homeostasis. : These findings suggest that could serve as a promising biomarker for predicting the high-risk transformation from BE to EAC, offering new insights into EAC progression and future therapeutic targets.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/5b4d2cd26d80/diagnostics-14-02863-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/a2339beea7ae/diagnostics-14-02863-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/23a94dd333e4/diagnostics-14-02863-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/8d35ffcfd484/diagnostics-14-02863-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/7c9c6e150807/diagnostics-14-02863-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/36ab27a5f1c6/diagnostics-14-02863-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/5b4d2cd26d80/diagnostics-14-02863-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/a2339beea7ae/diagnostics-14-02863-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/23a94dd333e4/diagnostics-14-02863-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/8d35ffcfd484/diagnostics-14-02863-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/7c9c6e150807/diagnostics-14-02863-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/36ab27a5f1c6/diagnostics-14-02863-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a1e/11675858/5b4d2cd26d80/diagnostics-14-02863-g006.jpg

相似文献

[1]
Identification of as a Potential Biomarker for Progression from Barrett's Esophagus to Esophageal Adenocarcinoma: A Comprehensive Bioinformatic Analysis.

Diagnostics (Basel). 2024-12-19

[2]
Biomarker identification and trans-regulatory network analyses in esophageal adenocarcinoma and Barrett's esophagus.

World J Gastroenterol. 2019-1-14

[3]
Decoding common genetic alterations between Barrett's esophagus and esophageal adenocarcinoma: A bioinformatics analysis.

Heliyon. 2024-5-14

[4]
Construction of the Interaction Network of Hub Genes in the Progression of Barrett's Esophagus to Esophageal Adenocarcinoma.

J Inflamm Res. 2023-4-12

[5]
Untangling immune cell contributions in the progression from GERD to Barrett's esophagus and esophageal cancer: Insights from genetic causal analysis.

Int Immunopharmacol. 2025-3-26

[6]
Identification of miRNAs and genes for predicting Barrett's esophagus progressing to esophageal adenocarcinoma using miRNA-mRNA integrated analysis.

PLoS One. 2021

[7]
Expression profiles of cancer stem cell markers: CD133, CD44, Musashi-1 and EpCAM in the cardiac mucosa-Barrett's esophagus-early esophageal adenocarcinoma-advanced esophageal adenocarcinoma sequence.

Pathol Res Pract. 2017-3

[8]
Persistence of nondysplastic Barrett's esophagus identifies patients at lower risk for esophageal adenocarcinoma: results from a large multicenter cohort.

Gastroenterology. 2013-5-25

[9]
Differential Expression of NEK Kinase Family Members in Esophageal Adenocarcinoma and Barrett's Esophagus.

Cancers (Basel). 2023-9-30

[10]
Hypermethylation of the AKAP12 promoter is a biomarker of Barrett's-associated esophageal neoplastic progression.

Cancer Epidemiol Biomarkers Prev. 2008-1

本文引用的文献

[1]
Decoding common genetic alterations between Barrett's esophagus and esophageal adenocarcinoma: A bioinformatics analysis.

Heliyon. 2024-5-14

[2]
Global cancer statistics 2022: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.

CA Cancer J Clin. 2024

[3]
Engineered hydrogel reveals contribution of matrix mechanics to esophageal adenocarcinoma and identifies matrix-activated therapeutic targets.

J Clin Invest. 2023-12-1

[4]
Construction of the Interaction Network of Hub Genes in the Progression of Barrett's Esophagus to Esophageal Adenocarcinoma.

J Inflamm Res. 2023-4-12

[5]
AGA Clinical Practice Update on New Technology and Innovation for Surveillance and Screening in Barrett's Esophagus: Expert Review.

Clin Gastroenterol Hepatol. 2022-12

[6]
Analysis of immune related gene expression profiles and immune cell components in patients with Barrett esophagus.

Sci Rep. 2022-6-2

[7]
Identification of miRNAs and genes for predicting Barrett's esophagus progressing to esophageal adenocarcinoma using miRNA-mRNA integrated analysis.

PLoS One. 2021

[8]
Barrett's Esophagus and Esophageal Adenocarcinoma Biomarkers.

Cancer Epidemiol Biomarkers Prev. 2020-12

[9]
The panoramic picture of pepsinogen gene family with pan-cancer.

Cancer Med. 2020-12

[10]
Esophageal Cancer Development: Crucial Clues Arising from the Extracellular Matrix.

Cells. 2020-2-17

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