Pereira Cátia D, Espadas Guadalupe, Martins Filipa, Bertrand Anne T, Servais Laurent, Sabidó Eduard, Chevalier Philippe, da Cruz E Silva Odete A B, Rebelo Sandra
Institute of Biomedicine (iBiMED), Department of Medical Sciences, University of Aveiro, 3810-193 Aveiro, Portugal.
Center for Genomics Regulation, The Barcelona Institute of Science and Technology (BIST), 08003 Barcelona, Spain.
Int J Mol Sci. 2024 Dec 10;25(24):13235. doi: 10.3390/ijms252413235.
The nuclear envelope (NE), a protective membrane bordering the nucleus, is composed of highly specialized proteins that are indispensable for normal cellular activity. Lamina-associated polypeptide 1 (LAP1) is a NE protein whose functions are just beginning to be unveiled. The fact that mutations causing LAP1 deficiency are extremely rare and pathogenic is indicative of its paramount importance to preserving human health, anticipating that LAP1 might have a multifaceted role in the cell. Mapping the LAP1 protein interactome is, thus, imperative to achieve an integrated view of its potential biological properties. To this end, we employed in silico- and mass spectrometry-based approaches to identify candidate LAP1-interacting proteins, whose functional attributes were subsequently characterized using bioinformatics tools. Our results reveal the complex and multifunctional network of protein-protein interactions associated to LAP1, evidencing a strong interconnection between LAP1 and cellular processes as diverse as chromatin and cytoskeleton organization, DNA repair, RNA processing and translation, as well as protein biogenesis and turnover, among others. Novel interactions between LAP1 and DNA repair proteins were additionally validated, strengthening the previously proposed involvement of LAP1 in the maintenance of genomic stability. Overall, this study reaffirms the biological relevance of LAP1 and the need to deepen our knowledge about this NE protein, providing new insights about its potential functional partners that will help guiding future research towards a mechanistic understanding of LAP1's functioning.
核膜(NE)是一种与细胞核相邻的保护膜,由对正常细胞活动不可或缺的高度专业化蛋白质组成。核纤层相关多肽1(LAP1)是一种核膜蛋白,其功能刚刚开始被揭示。导致LAP1缺乏的突变极其罕见且具有致病性,这一事实表明其对维护人类健康至关重要,预计LAP1可能在细胞中具有多方面的作用。因此,绘制LAP1蛋白相互作用组图谱对于全面了解其潜在生物学特性至关重要。为此,我们采用基于计算机模拟和质谱分析的方法来鉴定候选的LAP1相互作用蛋白,随后使用生物信息学工具对其功能特性进行了表征。我们的结果揭示了与LAP1相关的复杂且多功能的蛋白质-蛋白质相互作用网络,证明了LAP1与多种细胞过程之间存在紧密联系,这些过程包括染色质和细胞骨架组织、DNA修复、RNA加工和翻译,以及蛋白质生物合成和周转等。此外,还验证了LAP1与DNA修复蛋白之间的新相互作用,强化了先前提出的LAP1参与维持基因组稳定性的观点。总体而言,这项研究再次证实了LAP1的生物学相关性以及深入了解这种核膜蛋白的必要性,为其潜在的功能伙伴提供了新的见解,这将有助于指导未来的研究,以便从机制上理解LAP1的功能。