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有得必有失:修饰硝基呋喃标记的二氮杂螺辛烷的分子外围会重塑其抗菌活性谱。

You Win Some, You Lose Some: Modifying the Molecular Periphery of Nitrofuran-Tagged Diazaspirooctane Reshapes Its Antibacterial Activity Profile.

作者信息

Vinogradova Lyubov, Komarova Kristina, Lukin Alexey, Zhuravlev Maxim, Deniskin Dmitry, Poliakova Anastasia, Chudinov Mikhail, Gureev Maxim, Dogonadze Marine, Vinogradova Tatiana, Rogacheva Elizaveta, Kraeva Lyudmila, Porozov Yuri, Korzhikov-Vlakh Viktor

机构信息

Lomonosov Institute of Fine Chemical Technologies, MIREA-Russian Technological University, Moscow 119454, Russia.

Institute of Cytology, Russian Academy of Sciences, Saint Petersburg 194064, Russia.

出版信息

Int J Mol Sci. 2024 Dec 29;26(1):207. doi: 10.3390/ijms26010207.

Abstract

The use of the concept of privileged structures significantly accelerates the search for new leads and their optimization. 6-(methylsulfonyl)-8-(4-methyl-4-1,2,4-triazol-3-yl)-2-(5-nitro-2-furoyl)-2,6-diazaspiro[3.4]octane has been identified as a lead, with MICs of 0.0124-0.0441 μg/mL against multiresistant strains. Several series of structural analogues have been synthesized, including variations in the periphery and simplifications of their scaffolds. All synthesized compounds were tested against the H37Rv strain and ESKAPE panel of pathogens using serial broth dilutions. However, an attempt to optimize structure of did not lead to the development of more active compounds which can work against , but to substances with high activity against . Induced-fit docking and MM-GBSA calculations determined a change in the likely biotarget from deazaflavin-dependent nitroreductase to azoreductases. The privileged nature of the scaffold was demonstrated by the detection of a different type of activity.

摘要

特权结构概念的使用显著加速了新先导化合物的寻找及其优化。6-(甲基磺酰基)-8-(4-甲基-4-1,2,4-三唑-3-基)-2-(5-硝基-2-呋喃甲酰基)-2,6-二氮杂螺[3.4]辛烷已被确定为一种先导化合物,对多重耐药菌株的最低抑菌浓度为0.0124 - 0.0441μg/mL。已经合成了几个系列的结构类似物,包括外围结构的变化及其骨架的简化。所有合成的化合物都使用肉汤稀释法针对H37Rv菌株和ESKAPE病原体组进行了测试。然而,优化[具体化合物名称未给出]结构的尝试并没有导致开发出对[具体病原体未给出]更具活性的化合物,而是得到了对[具体病原体未给出]具有高活性的物质。诱导契合对接和MM - GBSA计算确定了可能的生物靶点从脱氮黄素依赖性硝基还原酶转变为偶氮还原酶。通过检测不同类型的活性证明了骨架的特权性质。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f006/11720470/d78254666eeb/ijms-26-00207-g001.jpg

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