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通过密度泛函理论(DFT)和对接研究对双(2-甲氧基-6-{[(2-甲基丙基)亚氨基]甲基}苯酚根)镍(II)配合物的合成及结构见解

Synthesis and structural insights of bis(2-methoxy-6-{[(2-methylpropyl)imino]methyl}phenolato) nickel (II) complex through DFT and docking investigations.

作者信息

Jayachandiran K, Esha Sv, Savitha Lakshmi M, Mahalakshmi S, Arockiasamy S

机构信息

Chemistry Department, School of Advanced Sciences, Vellore Institute of Technology-Chennai campus, Chennai, 600127, India.

出版信息

Sci Rep. 2025 Jan 11;15(1):1751. doi: 10.1038/s41598-025-85465-6.

Abstract

Nickel complexes are a potential candidate for antibacterial and antifungal activity. A new Ni (II) complex, bis(2-methoxy-6-{[(2-methylpropyl)imino]methyl}phenolato)nickel (II) (2), was synthesised by reacting, bis(3-methoxy-salicylaldehyde)nickel (II) (1) with isobutylamine. It was characterised by single crystal X-ray diffraction (ScXRD), UV-Vis, NMR, IR, mass spectrometry, and thermogravimetry (TG) to study its structure and physico-chemical properties. The ScXRD showed a square planar geometry, and monoclinic crystal system with a space group P21/n. The TG analysis revealed its thermal durability pre and post-melting up to 225 C with a weight loss of only 2%. The optimized molecular structure, energy gap between HOMO and LUMO, and intermolecular interactions were studied by computational methods. The microbial activity evaluation showed significant anti-bacterial activity against E. coli and S. aureus when the concentration exceeded 40 µg/mL, and a prominent anti-fungal activity over C. albicans and C. tropicalis above 30 µg/mL. The values of minimum inhibitory concentration (MIC) for bacteria (MIB) and fungi (MIF) implied its potential to inhibit the growth of microbes. Docking studies revealed that the molecule binds well with proteins such as PDB: 2W9H for Dihydrofolate Reductase of S.aureus as shown by its binding energy of -8.62 kcal.mol.

摘要

镍配合物是具有抗菌和抗真菌活性的潜在候选物。通过使双(3-甲氧基水杨醛)镍(II)(1)与异丁胺反应,合成了一种新的镍(II)配合物,双(2-甲氧基-6-{[(2-甲基丙基)亚氨基]甲基}苯酚根)镍(II)(2)。通过单晶X射线衍射(ScXRD)、紫外可见光谱、核磁共振、红外光谱、质谱和热重分析(TG)对其进行了表征,以研究其结构和物理化学性质。ScXRD显示其具有平面正方形几何结构,属于单斜晶系,空间群为P21/n。TG分析表明,其在225℃熔化前后具有热稳定性,重量损失仅为2%。通过计算方法研究了其优化的分子结构、最高占据分子轨道(HOMO)和最低未占据分子轨道(LUMO)之间的能隙以及分子间相互作用。微生物活性评估表明,当浓度超过40μg/mL时,该配合物对大肠杆菌和金黄色葡萄球菌具有显著的抗菌活性,当浓度高于30μg/mL时,对白色念珠菌和热带念珠菌具有显著的抗真菌活性。细菌(MIB)和真菌(MIF)的最低抑菌浓度(MIC)值表明其具有抑制微生物生长的潜力。对接研究表明,该分子与蛋白质如金黄色葡萄球菌二氢叶酸还原酶的PDB:2W9H结合良好,其结合能为-8.62kcal.mol。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c18e/11724891/213ff9123628/41598_2025_85465_Fig1_HTML.jpg

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