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硒氰酸盐对组蛋白去乙酰化酶6的基于机制的抑制作用受氧化还原调节。

Mechanism-Based Inhibition of Histone Deacetylase 6 by a Selenocyanate is Subject to Redox Modulation.

作者信息

Christianson David W, Stollmaier Juana Goulart, Czarnecki Briana Abigail R

机构信息

Roy and Diana Vagelos Laboratories, Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania, 19104-6323, United States.

出版信息

bioRxiv. 2025 Jan 4:2025.01.04.631333. doi: 10.1101/2025.01.04.631333.

DOI:10.1101/2025.01.04.631333
PMID:39803514
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11722227/
Abstract

Organoselenocyanates have attracted considerable attention in recent years due to their therapeutic potential and versatility in medicinal chemistry. Here, we report on the mechanism of inhibition by 5-phenylcarbamoylpentyl selenocyanide (SelSA-2), an analogue of the well-characterized histone deacetylase inhibitor suberoylanilide hydroxamic acid (SAHA, a.k.a. Vorinostat). We show that histone deacetylases 6 and 10 can promote selenocyanate hydrolysis to generate a selenolate anion, and we explore the redox chemistry of selenium as it modulates inhibitory activity through reversible formation of the diselenide. The 2.15 Å-resolution crystal structure of histone deacetylase 6 cocrystallized with SelSA-2 conclusively demonstrates that it is not the selenocyanate, but instead the selenolate anion, that is the active pharmacophore responsible for enzyme inhibition.

摘要

近年来,有机硒氰酸盐因其治疗潜力和在药物化学中的多功能性而备受关注。在此,我们报告5-苯基氨基甲酰基戊基硒氰化物(SelSA-2)的抑制机制,它是特征明确的组蛋白脱乙酰酶抑制剂辛二酰苯胺异羟肟酸(SAHA,又名伏立诺他)的类似物。我们表明,组蛋白脱乙酰酶6和10可促进硒氰酸盐水解生成硒醇盐阴离子,并且我们探索了硒的氧化还原化学,因为它通过二硒化物的可逆形成来调节抑制活性。与SelSA-2共结晶的组蛋白脱乙酰酶6的2.15 Å分辨率晶体结构最终证明,负责酶抑制的活性药效基团不是硒氰酸盐,而是硒醇盐阴离子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f030/11722227/a56dd9edd9b7/nihpp-2025.01.04.631333v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f030/11722227/6772c6a70f67/nihpp-2025.01.04.631333v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f030/11722227/7c47df041547/nihpp-2025.01.04.631333v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f030/11722227/a56dd9edd9b7/nihpp-2025.01.04.631333v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f030/11722227/6772c6a70f67/nihpp-2025.01.04.631333v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f030/11722227/7c47df041547/nihpp-2025.01.04.631333v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f030/11722227/a56dd9edd9b7/nihpp-2025.01.04.631333v1-f0004.jpg

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本文引用的文献

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Advances in understanding the roles of plant HAT and HDAC in non-histone protein acetylation and deacetylation.在理解植物 HAT 和 HDAC 在非组蛋白蛋白乙酰化和去乙酰化中的作用方面的进展。
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Histone Deacetylase 6 Inhibitor 5-Phenylcarbamoylpentyl Selenocyanide (SelSA) Suppresses Hepatocellular Carcinoma by Downregulating Phosphorylation of the Extracellular Signal-Regulated Kinase 1/2 Pathway.
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Chemical Versatility in Catalysis and Inhibition of the Class IIb Histone Deacetylases.催化和抑制 IIb 类组蛋白去乙酰化酶中的化学多功能性。
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