• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于螺吲哚满二酮的α-酰腙中分子内非共价C键驱动的构象偏好

Intramolecular noncovalent C-bonding driven conformational preference in spiroisatin-based -acyl hydrazones.

作者信息

Ali Muhammad Imran, Hussain Javid, Anwar Muhammad Usman, Al-Harrasi Ahmed, Naseer Muhammad Moazzam

机构信息

Department of Chemistry, Quaid-i-Azam University Islamabad 45320 Pakistan

Department of Biological Sciences & Chemistry, College of Arts and Sciences, University of Nizwa Nizwa Oman.

出版信息

RSC Adv. 2025 Jan 13;15(2):1152-1162. doi: 10.1039/d4ra08086f. eCollection 2025 Jan 9.

DOI:10.1039/d4ra08086f
PMID:39807186
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11728378/
Abstract

Noncovalent carbon bonding (C-bonding), a recently explored σ-hole interaction, has primarily been characterized through X-ray structural and computational studies. Evidence of C-bonds in solution is scarce, especially in highly polar solvents like DMSO where solvation effects typically overshadow weak non-covalent interactions. In this work, we present three novel spiroisatin-based -acyl hydrazones (1-3) in which C-bonds play a critical role in stabilizing the conformation in solution. Despite the steric preference for the NH-amide bond to adopt the geometry (H-N-C[double bond, length as m-dash]O ≈ 180°), H and C NMR spectra of compounds 1 and 2 in DMSO- reveal a rotameric mixture with a higher percentage of the conformation (82% and 76%, respectively), attributed to the stability provided by intramolecular C-bonding. Compound 3 also predominantly adopts the conformation in DMSO but to a lesser extent (60%) than compounds 1 and 2, due to competing intramolecular hydrogen bonding. Single-crystal X-ray analysis of compounds 1 and 2 confirmed the conformation, consistent with the solution-state preference. In contrast, compound 3 crystallized in the form, likely due to intramolecular hydrogen bonding and solid-state packing effects, which reinforce the steric preference for the geometry. Density functional theory (DFT) calculations corroborated the experimental data, predicting greater stability for the conformations in compounds 1, 2, and 3 in solution. The ability of intramolecular C-bonding to stabilize the conformation, even in highly polar solvents like DMSO, highlights the broader significance of this interaction in supramolecular chemistry and related fields.

摘要

非共价碳键合(C键合)是一种最近被探索的σ-空穴相互作用,主要通过X射线结构和计算研究进行表征。溶液中C键的证据很少,特别是在像二甲基亚砜(DMSO)这样的高极性溶剂中,溶剂化效应通常会掩盖弱的非共价相互作用。在这项工作中,我们展示了三种新型的基于螺异吲哚酮的酰腙(1-3),其中C键在稳定溶液中的构象方面起着关键作用。尽管NH-酰胺键在空间上倾向于采用顺式几何结构(H-N-C=O≈180°),但化合物1和2在DMSO-d6中的1H和13C NMR光谱显示出一种旋转异构体混合物,其中顺式构象的百分比更高(分别为82%和76%),这归因于分子内C键合提供的稳定性。化合物3在DMSO中也主要采用顺式构象,但程度比化合物1和2小(60%),这是由于分子内氢键的竞争。化合物1和2的单晶X射线分析证实了顺式构象,与溶液状态的偏好一致。相比之下,化合物3以反式形式结晶,可能是由于分子内氢键和固态堆积效应,这加强了对反式几何结构的空间偏好。密度泛函理论(DFT)计算证实了实验数据,预测化合物1、2和3在溶液中的顺式构象具有更高的稳定性。分子内C键合即使在像DMSO这样的高极性溶剂中也能稳定顺式构象的能力,突出了这种相互作用在超分子化学及相关领域的更广泛意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/6043c84e3fcd/d4ra08086f-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/c0036304d90f/d4ra08086f-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/ebc118389c13/d4ra08086f-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/282783d6e55c/d4ra08086f-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/4e275aa27db8/d4ra08086f-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/1cf062190749/d4ra08086f-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/f3f902f1d0c4/d4ra08086f-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/44b36b4000f8/d4ra08086f-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/6043c84e3fcd/d4ra08086f-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/c0036304d90f/d4ra08086f-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/ebc118389c13/d4ra08086f-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/282783d6e55c/d4ra08086f-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/4e275aa27db8/d4ra08086f-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/1cf062190749/d4ra08086f-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/f3f902f1d0c4/d4ra08086f-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/44b36b4000f8/d4ra08086f-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f053/11728378/6043c84e3fcd/d4ra08086f-f8.jpg

相似文献

1
Intramolecular noncovalent C-bonding driven conformational preference in spiroisatin-based -acyl hydrazones.基于螺吲哚满二酮的α-酰腙中分子内非共价C键驱动的构象偏好
RSC Adv. 2025 Jan 13;15(2):1152-1162. doi: 10.1039/d4ra08086f. eCollection 2025 Jan 9.
2
Intramolecular hydrogen bonding in disubstituted ethanes. A comparison of NH...O- and OH...O- Hydrogen bonding through conformational analysis of 4-amino-4-oxobutanoate (succinamate) and monohydrogen 1,4-butanoate (monohydrogen succinate) anions.二取代乙烷中的分子内氢键。通过对4-氨基-4-氧代丁酸酯(琥珀酰胺酸酯)和单氢1,4-丁酸酯(单氢琥珀酸酯)阴离子的构象分析比较NH…O-和OH…O-氢键。
J Phys Chem A. 2005 Oct 13;109(40):9076-82. doi: 10.1021/jp052925c.
3
Strength from weakness: conformational divergence between solid and solution states of substituted cyclitols facilitated by CH···O hydrogen bonding.
J Org Chem. 2014 Jun 6;79(11):4892-908. doi: 10.1021/jo5004778. Epub 2014 May 12.
4
Steric and electronic interactions controlling the cis/trans isomer equilibrium at X-Pro tertiary amide motifs in solution.溶液中X-Pro叔酰胺基序处控制顺式/反式异构体平衡的空间和电子相互作用。
Biopolymers. 2014 Jan;101(1):66-77. doi: 10.1002/bip.22278.
5
Solvent-Dependent Structures of Natural Products Based on the Combined Use of DFT Calculations and H-NMR Chemical Shifts.基于密度泛函理论计算和 H-NMR 化学位移的联合应用研究溶剂依赖的天然产物结构。
Molecules. 2019 Jun 20;24(12):2290. doi: 10.3390/molecules24122290.
6
Impact of azaproline on Peptide conformation.氮杂脯氨酸对肽构象的影响。
J Org Chem. 2004 Dec 24;69(26):9030-42. doi: 10.1021/jo0487303.
7
Intramolecular Noncovalent Carbon Bonding Interaction Stabilizes the cis Conformation in Acylhydrazones.分子内非共价碳键相互作用稳定酰腙中的顺式构象。
Chempluschem. 2018 Sep;83(9):881-885. doi: 10.1002/cplu.201800329. Epub 2018 Sep 19.
8
Conformational preference of fused carbohydrate-templated proline analogues--a computational study.融合糖模板脯氨酸类似物构象偏好的计算研究。
J Phys Chem B. 2013 Jan 10;117(1):199-205. doi: 10.1021/jp310690c. Epub 2012 Dec 27.
9
Competitive Intramolecular Hydrogen Bonding: Offering Molecules a Choice.
Chempluschem. 2024 Aug;89(8):e202400055. doi: 10.1002/cplu.202400055. Epub 2024 Jun 4.
10
Unconventional O-H···C Hydrogen Bonding and Effects of Conformational Changes on Infrared Spectroscopy of o-Cresol in Solutions.邻甲酚在溶液中的非常规O-H···C氢键及构象变化对其红外光谱的影响
J Phys Chem A. 2016 Dec 29;120(51):10196-10206. doi: 10.1021/acs.jpca.6b06945. Epub 2016 Dec 14.

引用本文的文献

1
Synthesis, structural insights and bio-evaluation of -phenoxyethylisatin hydrazones as potent α-glucosidase inhibitors.作为强效α-葡萄糖苷酶抑制剂的苯氧基乙基异吲哚酮腙的合成、结构见解及生物评价
RSC Adv. 2025 May 7;15(19):14717-14729. doi: 10.1039/d5ra00770d. eCollection 2025 May 6.
2
Exploring the Structural Versatility and Dynamic Behavior of Acyl/Aroyl Hydrazones: A Comprehensive Review.酰基/芳酰腙的结构多样性与动态行为探究:综述
Top Curr Chem (Cham). 2025 Apr 8;383(2):18. doi: 10.1007/s41061-025-00503-1.

本文引用的文献

1
Plethora of Non-Covalent Interactions in Coordination and Organometallic Chemistry Are Modern Smart Tool for Materials Science, Catalysis, and Drugs Design.配位和金属有机化学中的大量非共价相互作用是材料科学、催化和药物设计的现代智能工具。
Int J Mol Sci. 2022 Nov 25;23(23):14767. doi: 10.3390/ijms232314767.
2
Synthesis of Novel -Acylhydrazones and Their C-N/N-N Bond Conformational Characterization by NMR Spectroscopy.新型酰腙的合成及其通过 NMR 光谱对 C-N/N-N 键构象特征的研究。
Molecules. 2021 Aug 13;26(16):4908. doi: 10.3390/molecules26164908.
3
Catalysis with Supramolecular Carbon-Bonding Interactions.
具有超分子碳键相互作用的催化作用。
Angew Chem Int Ed Engl. 2021 Oct 11;60(42):22717-22721. doi: 10.1002/anie.202108973. Epub 2021 Sep 13.
4
Engineering Crystals Using sp -C Centred Tetrel Bonding Interactions.利用 sp^C 中心的四中心键合相互作用来工程晶体。
Chemistry. 2020 Aug 6;26(44):10126-10132. doi: 10.1002/chem.202002613. Epub 2020 Jul 20.
5
Conformational control of N-methyl-N,N'-diacylhydrazines by noncovalent carbon bonding in solution.在溶液中非共价碳键对 N-甲基-N,N'-二酰基酰肼的构象控制。
Chem Commun (Camb). 2020 May 4;56(36):4874-4877. doi: 10.1039/d0cc00943a. Epub 2020 Apr 7.
6
Intramolecular Noncovalent Carbon Bonding Interaction Stabilizes the cis Conformation in Acylhydrazones.分子内非共价碳键相互作用稳定酰腙中的顺式构象。
Chempluschem. 2018 Sep;83(9):881-885. doi: 10.1002/cplu.201800329. Epub 2018 Sep 19.
7
Noncovalent Carbon-Bonding Interactions in Proteins.蛋白质中非共价碳键相互作用。
Angew Chem Int Ed Engl. 2018 Dec 10;57(50):16496-16500. doi: 10.1002/anie.201811171. Epub 2018 Nov 12.
8
Chalcogen 'like-like' Interactions Involving Trisulphide and Triselenide Compounds: A Combined CSD and Ab Initio Study.涉及三硫化物和三硒化物化合物的类硫属元素相互作用:CSD 和从头算的综合研究。
Molecules. 2018 Mar 19;23(3):699. doi: 10.3390/molecules23030699.
9
The σ-hole revisited.再探σ-空穴。
Phys Chem Chem Phys. 2017 Dec 13;19(48):32166-32178. doi: 10.1039/c7cp06793c.
10
Importance of R-CF···O Tetrel Bonding Interactions in Biological Systems.R-CF···O四元环键相互作用在生物系统中的重要性。
J Phys Chem A. 2017 Jul 20;121(28):5371-5376. doi: 10.1021/acs.jpca.7b06052. Epub 2017 Jul 11.