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微生物酰胺酶:特性、进展与生物技术应用

Microbial amidases: Characterization, advances and biotechnological applications.

作者信息

Singh Rajendra, Shahul Refana, Kumar Vijay, Yadav Ashok Kumar, Mehta Praveen Kumar

机构信息

Department of Biological and Environmental Science, Dongguk University, Goyang, Gyeonggi-do, South Korea.

Centre for Molecular Biology, Central University of Jammu, Rahya Suchani (Bagla), Jammu & Kashmir, India.

出版信息

Biotechnol Notes. 2024 Dec 19;6:44-58. doi: 10.1016/j.biotno.2024.12.003. eCollection 2025.

Abstract

The amidases (EC 3.5.1.4) are versatile hydrolase biocatalysts that have been the attention of academia and industries for stereo-selective synthesis and bioremediation. These are categorized based on the amino acid sequence and substrate specificity. Notably, the Signature amidase family is distinguished by a characteristic signature sequence, GGSS(S/G)GS, which encompasses highly conserved Ser-Ser-Lys catalytic residues, and the amidases belonging to this family typically demonstrate a broad substrate spectrum activity. The amidases classified within the nitrilase superfamily possess distinct Glu-Lys-Cys catalytic residues and exhibit activity towards small aliphatic substrates. Recent discoveries have underscored the potential role of amidases in the degradation of toxic amides present in polymers, insecticides, and food products. This expands the horizons for amidase-mediated biodegradation of amide-laden pollutants and fosters sustainable development alongside organic synthesis. The burgeoning global production facilities are expected to drive a heightened demand for this enzyme, attributable to its promising chemo-, regio-, and enantioselective hydrolysis capabilities for a variety of amides. Advances in protein engineering have enhanced the catalytic efficiency, structural stability, and substrate selectivity of amidases. Concurrently, the heterologous expression of amidase genes sourced from thermophiles has facilitated the development of highly stable amidases with significant industrial relevance. Beyond their biotransformation capabilities concerning amides, through amido-hydrolase and acyltransferase activities, recent investigations have illuminated the potential of amidase-mediated degradation of amide-containing pollutants in soil and aquatic environments. This review offers a comprehensive overview of recent advancements pertaining to microbial amidases (EC 3.5.1.4), focusing on aspects such as their distribution, gene mining methodologies, enzyme stability, protein engineering, reusability, and biocatalytic efficacy in organic synthesis and biodegradation.

摘要

酰胺酶(EC 3.5.1.4)是一种多功能水解酶生物催化剂,在立体选择性合成和生物修复方面受到学术界和工业界的关注。这些酶根据氨基酸序列和底物特异性进行分类。值得注意的是,特征酰胺酶家族以特征性的特征序列GGSS(S/G)GS为特征,该序列包含高度保守的Ser-Ser-Lys催化残基,属于该家族的酰胺酶通常表现出广泛的底物谱活性。腈水解酶超家族中的酰胺酶具有独特的Glu-Lys-Cys催化残基,并对小脂肪族底物表现出活性。最近的发现强调了酰胺酶在降解聚合物、杀虫剂和食品中存在的有毒酰胺方面的潜在作用。这拓宽了酰胺酶介导的含酰胺污染物生物降解的视野,并促进了与有机合成并行的可持续发展。由于其对多种酰胺具有有前景的化学、区域和对映选择性水解能力,全球新兴的生产设施预计将推动对这种酶的需求增加。蛋白质工程的进展提高了酰胺酶的催化效率、结构稳定性和底物选择性。同时,来自嗜热菌的酰胺酶基因的异源表达促进了具有重要工业相关性的高度稳定酰胺酶的开发。除了它们关于酰胺的生物转化能力外,通过酰胺水解酶和酰基转移酶活性,最近的研究揭示了酰胺酶介导的土壤和水环境中含酰胺污染物降解的潜力。本综述全面概述了与微生物酰胺酶(EC 3.5.1.4)相关的最新进展,重点关注其分布、基因挖掘方法、酶稳定性、蛋白质工程、可重复使用性以及在有机合成和生物降解中的生物催化功效等方面。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9f1c/11732141/fcf5fb64016a/gr1.jpg

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