Suppr超能文献

基于气相色谱-质谱联用仪测量的猪血代谢组学图谱对抗凝剂对死后间隔时间估计影响的比较分析。

Comparative analysis of anticoagulant influence on PMI estimation based on porcine blood metabolomics profile measured using GC-MS.

作者信息

Mojsak Patrycja, Samczuk Paulina, Klimaszewska Paulina, Burdukiewicz Michal, Chilimoniuk Jaroslaw, Grzesiak Krystyna, Pietrowska Karolina, Ciborowska Justyna, Niemcunowicz-Janica Anna, Kretowski Adam, Ciborowski Michal, Szeremeta Michal

机构信息

Metabolomics and Proteomics Laboratory, Clinical Research Centre, Medical University of Bialystok, Bialystok, Poland.

Department of Genetic Research, Central Forensic Laboratory of the Police, Warsaw, Poland.

出版信息

Front Mol Biosci. 2025 Jan 7;11:1400622. doi: 10.3389/fmolb.2024.1400622. eCollection 2024.

Abstract

INTRODUCTION

Accurate post-mortem interval (PMI) estimation is essential in forensic investigations. Although various methods for PMI determination have been developed, only an approximate estimation is still achievable, and an accurate PMI indication is still challenging. Therefore, in this study, we employed gas chromatography-mass spectrometry (GC-MS)-based metabolomics to assess post-mortem changes in porcine blood samples collected with and without the addition of anticoagulant (EDTA). Our study aimed to identify metabolites dependent on the EDTA addition and time (taking into account the biodiversity of the studied organism) and those that are time-dependent but resistant to the addition of an anticoagulant.

METHODS

The experiment was performed on blood samples collected from 16 animals (domestic pig, breed: Polish Large White), 8 with and 8 without EDTA addition. The moment of death (time 0) and 15 additional time points (from 3 to 168 h after death) were selected to examine changes in metabolites' levels in specific time intervals. We employed linear mixed models to study the relationship between metabolite intensities, time and presence of EDTA while accounting for the effect of individual pigs.

RESULTS AND DISCUSSION

We confirmed that the intensity of 16 metabolites (mainly amino acids) significantly depends on PMI and the presence of EDTA. However, the intensity of the ideal biomarker(s) for PMI estimation should be determined only by the time after death and not by external factors such as the presence of the anticoagulant agent. Thus, we identified 41 metabolites with time-dependent intensities that were not susceptible to EDTA presence. Finally, we assessed the performance of these metabolites in a PMI predictive model. Citraconic acid yielded one of the lowest errors in general PMI estimation (32.82 h). Moreover, similar errors were observed for samples with and without EDTA (33.32 h and 32.34 h, respectively). Although the small sample size and information leak in predictive modelling prevent drawing definite conclusions, citraconic acid shows potential as a robust PMI estimator.

摘要

引言

准确估计死后间隔时间(PMI)在法医调查中至关重要。尽管已经开发出多种确定PMI的方法,但目前仍只能进行大致估算,准确指示PMI仍然具有挑战性。因此,在本研究中,我们采用基于气相色谱-质谱联用(GC-MS)的代谢组学方法,评估添加和不添加抗凝剂(乙二胺四乙酸,EDTA)采集的猪血液样本中的死后变化。我们的研究旨在确定依赖于EDTA添加和时间的代谢物(考虑到所研究生物体的生物多样性)以及那些随时间变化但不受抗凝剂添加影响的代谢物。

方法

对从16只动物(家猪,品种:波兰大白猪)采集的血液样本进行实验,其中8只添加EDTA,8只不添加。选择死亡时刻(时间0)和另外15个时间点(死后3至168小时),以检查特定时间间隔内代谢物水平的变化。我们采用线性混合模型研究代谢物强度、时间和EDTA存在之间的关系,同时考虑个体猪的影响。

结果与讨论

我们证实16种代谢物(主要是氨基酸)的强度显著依赖于PMI和EDTA的存在。然而,用于估计PMI的理想生物标志物的强度应仅由死后时间决定,而不受抗凝剂等外部因素影响。因此,我们确定了41种强度随时间变化且不受EDTA存在影响的代谢物。最后,我们在PMI预测模型中评估了这些代谢物的性能。柠康酸在总体PMI估计中产生的误差最低(32.82小时)。此外,添加和未添加EDTA的样本的误差相似(分别为33.32小时和32.34小时)。尽管预测模型中的样本量小和信息泄露妨碍得出明确结论,但柠康酸显示出作为可靠PMI估计指标的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ccdb/11746058/4d3c37baf097/fmolb-11-1400622-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验