Joshi Manas, Khan Mohd Mabood
Department of Zoology, University of Lucknow, Lucknow 226007, India.
Department of Medicine, Vanderbilt University Medical Centre, Nashville, TN 37232, USA.
Noncoding RNA. 2025 Jan 15;11(1):6. doi: 10.3390/ncrna11010006.
Hyperuricemia is characterized by increased uric acid (UA) in the body. The ability to block xanthine oxidase (XO) is a useful way to check how different bioactive molecules affect hyperuricemia. Previous reports showed the significant effect of corn against hyperuricemia disorder with its anti-XO activity. The identification of stable Zea mays miRNA (zma-miR) in humans has opened up a new avenue for speculation about its part in regulating novel human gene targets.
The aim of this study was to investigate the prospects of zma-miRs in XO gene regulation, the possible mechanism, and the interaction analysis of the zma-miR-XO mRNA transcript.
Significant features of miRNA-mRNA interaction were revealed using two popular miRNA target prediction software-intaRNA (version 3.3.1) and RNA hybrid (version 2.2.1) Results: Only 12 zma-miR-156 variants, out of the 325 zma-miR's sequences reported in the miRNA database, efficiently interact with the 3'UTR of the XO gene. Characteristics of miRNA-mRNA interaction were as follows: the positioning of zma-miR-156 variants shows that they all have the same 11-mer binding sites, guanine (G), and uracil (U) loops at the 13th and 14th positions from the 5' end, and no G: U wobble pairing. These factors are related to the inhibition of functional mRNA expression. Additionally, the zma-miR-156 variants exhibit a single-base variation (SBV), which leads to distinct yet highly effective alterations in their interaction pattern with the XO mRNA transcript and the corresponding free energy values.
Therefore, we propose that zma-miR-156 variants may be a promising new bioactive compound against hyperuricemia and related diseases.
高尿酸血症的特征是体内尿酸(UA)增加。阻断黄嘌呤氧化酶(XO)的能力是一种有用的方法,可用于研究不同生物活性分子如何影响高尿酸血症。先前的报告显示,玉米具有抗XO活性,对高尿酸血症具有显著疗效。在人类中鉴定出稳定的玉米miRNA(zma-miR),为推测其在调节新的人类基因靶点中的作用开辟了一条新途径。
本研究旨在探讨zma-miR在XO基因调控中的前景、可能的机制以及zma-miR-XO mRNA转录本的相互作用分析。
使用两种流行的miRNA靶标预测软件——intaRNA(版本3.3.1)和RNA hybrid(版本2.2.1)揭示miRNA-mRNA相互作用的显著特征。
在miRNA数据库中报告的325个zma-miR序列中,只有12个zma-miR-156变体与XO基因的3'UTR有效相互作用。miRNA-mRNA相互作用的特征如下:zma-miR-156变体的定位表明,它们都具有相同的11聚体结合位点,在5'端第13和14位有鸟嘌呤(G)和尿嘧啶(U)环,且没有G:U摆动配对。这些因素与功能性mRNA表达的抑制有关。此外,zma-miR-156变体表现出单碱基变异(SBV),这导致它们与XO mRNA转录本的相互作用模式以及相应的自由能值发生明显但高效的改变。
因此,我们认为zma-miR-156变体可能是一种有前景的抗高尿酸血症及相关疾病的新型生物活性化合物。