Hooykaas Marjolein J G, Hooykaas Paul J J
Institute Biology Leiden (IBL), Leiden University, 2333 BE Leiden, The Netherlands.
Microorganisms. 2025 Jan 7;13(1):102. doi: 10.3390/microorganisms13010102.
Crown gall disease in plants is caused by "Agrobacteria", bacteria belonging to the family, which carry a tumor-inducing (Ti) plasmid. Unexpectedly, we found evidence that a natural isolate from a rose crown gall, called NBC51/LBA8980, was a bacterium that did not belong to the family. Whole-genome sequencing revealed that this bacterium contained three large DNA circles with rRNA and tRNA genes, representing one chromosome and two chromids, respectively, and two megaplasmids, including a Ti plasmid. Average nucleotide identity (ANIb, ANIm) and genome-to-genome distance (GGDC) values above the thresholds of 96% and 70%, respectively, showed that NBC51/LBA8980 belonged to the species ( Its Ti plasmid was almost identical to certain succinamopine Ti plasmids previously identified in strains, suggesting that this Ti plasmid may have been recently acquired by NBC51/LBA8980 in the tumor environment.
植物冠瘿病由属于该菌科的“土壤杆菌”引起,这些细菌携带一种致瘤(Ti)质粒。出乎意料的是,我们发现证据表明,从玫瑰冠瘿中分离出的一株天然菌株NBC51/LBA8980并非属于该菌科的细菌。全基因组测序显示,这种细菌含有三个带有rRNA和tRNA基因的大DNA环,分别代表一条染色体和两条染色体外遗传因子,以及两个大质粒,包括一个Ti质粒。平均核苷酸一致性(ANIb、ANIm)和基因组到基因组距离(GGDC)值分别高于96%和70%的阈值,表明NBC51/LBA8980属于该物种(其Ti质粒与先前在该菌株中鉴定的某些琥珀碱型Ti质粒几乎相同,这表明该Ti质粒可能是NBC51/LBA8980最近在肿瘤环境中获得的。