Yakubovskij Vyacheslav I, Morozova Vera V, Kozlova Yuliya N, Tikunov Artem Yu, Fedorets Valeria A, Zhirakovskaya Elena V, Babkin Igor V, Bardasheva Alevtina V, Tikunova Nina V
Laboratory of Molecular Microbiology, Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, 630090 Novosibirsk, Russia.
Viruses. 2025 Jan 9;17(1):83. doi: 10.3390/v17010083.
is an important opportunistic pathogen often resistant to antibiotics. Specific phages can be useful in eliminating infection caused by . phage vB_KlebPS_265 (KlebP_265) and its host strain were isolated from the sputum of a patient with infection. KlebP_265 was specific mainly to -type K2 strains including hypermucoid strains. Most of the hypermucoid KlebP_265-susceptible strains were antibiotic-resistant. This siphophage demonstrated good lytic activity and stability. The KlebP_265 genome was 46,962 bp and contained 88 putative genes; functions were predicted for 37 of them. No genes encoding integrases, toxins, or antibiotic resistance were found in the genome. So, KlebP_265 could potentially be a therapeutic phage. Comparative analysis indicated that KlebP_265 with the most relative phage DP01 formed the putative genus. Genome analysis revealed a large monophyletic group of phages related to KlebP_265 and DP01. This group is divided into two monophyletic clusters of phages forming new putative subfamilies and . Phylogenetic analysis showed extensive gene exchange between phages from the putative subfamilies. Horizontal transfer even involved conservative genes and led to clear genomic mosaicism, indicating multiple recombination events in the ancestral phages during evolution.
是一种重要的机会致病菌,常对抗生素耐药。特定的噬菌体可用于消除由其引起的感染。噬菌体vB_KlebPS_265(KlebP_265)及其宿主菌株从一名感染患者的痰液中分离得到。KlebP_265主要对包括高黏液型菌株在内的K2型菌株具有特异性。大多数对KlebP_265敏感的高黏液型菌株具有抗生素耐药性。这种肌尾噬菌体表现出良好的裂解活性和稳定性。KlebP_265基因组为46,962 bp,包含88个推定基因;其中37个基因的功能已被预测。基因组中未发现编码整合酶、毒素或抗生素耐药性的基因。因此,KlebP_265有可能成为一种治疗性噬菌体。比较分析表明,KlebP_265与亲缘关系最密切的噬菌体DP01形成了推定的属。基因组分析揭示了一个与KlebP_265和DP01相关的噬菌体大单系群。该群分为两个噬菌体单系簇,形成了新的推定亚科 和 。系统发育分析表明,推定亚科的噬菌体之间存在广泛的基因交换。水平转移甚至涉及保守基因,并导致明显的基因组镶嵌现象,表明祖先噬菌体在进化过程中发生了多次重组事件。