• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

降解结构域及其介导靶向蛋白质降解能力的探索。

Exploration of degrons and their ability to mediate targeted protein degradation.

作者信息

Harris Timothy J, Trader Darci J

机构信息

Department of Pharmaceutical Sciences, University of California Irvine California 92617 USA

Department of Chemistry, University of California Irvine California 92617 USA.

出版信息

RSC Med Chem. 2025 Jan 1. doi: 10.1039/d4md00787e.

DOI:10.1039/d4md00787e
PMID:39867589
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11758578/
Abstract

Degrons are short amino acid sequences that can facilitate the degradation of protein substrates. They can be classified as either ubiquitin-dependent or -independent based on their interactions with the ubiquitin proteasome system (UPS). These amino acid sequences are often found in exposed regions of proteins serving as either a tethering point for an interaction with an E3 ligase or initiating signaling for the direct degradation of the protein. Recent advancements in the protein degradation field have shown the therapeutic potential of both classes of degrons through leveraging their degradative effects to engage specific protein targets. This review explores what targeted protein degradation applications degrons can be used in and how they have inspired new degrader technology to target a wide variety of protein substrates.

摘要

降解决定子是能够促进蛋白质底物降解的短氨基酸序列。根据它们与泛素蛋白酶体系统(UPS)的相互作用,可将其分为依赖泛素或不依赖泛素两类。这些氨基酸序列通常位于蛋白质的暴露区域,要么作为与E3连接酶相互作用的连接点,要么启动蛋白质直接降解的信号。蛋白质降解领域的最新进展表明,通过利用这两类降解决定子的降解作用来作用于特定蛋白质靶点,它们具有治疗潜力。本综述探讨了降解决定子可用于哪些靶向蛋白质降解应用,以及它们如何激发了新的降解剂技术来靶向多种蛋白质底物。

相似文献

1
Exploration of degrons and their ability to mediate targeted protein degradation.降解结构域及其介导靶向蛋白质降解能力的探索。
RSC Med Chem. 2025 Jan 1. doi: 10.1039/d4md00787e.
2
Systematic prediction of degrons and E3 ubiquitin ligase binding via deep learning.通过深度学习系统地预测降解信号和 E3 泛素连接酶结合。
BMC Biol. 2022 Jul 14;20(1):162. doi: 10.1186/s12915-022-01364-6.
3
Counting Degrons: Lessons From Multivalent Substrates for Targeted Protein Degradation.计算降解结构域:多价底物用于靶向蛋白质降解的经验教训
Front Physiol. 2022 Jul 4;13:913063. doi: 10.3389/fphys.2022.913063. eCollection 2022.
4
DegronMD: Leveraging Evolutionary and Structural Features for Deciphering Protein-Targeted Degradation, Mutations, and Drug Response to Degrons.DegronMD:利用进化和结构特征来破译靶向蛋白降解、突变和 Degron 药物反应
Mol Biol Evol. 2023 Dec 1;40(12). doi: 10.1093/molbev/msad253.
5
Identification of ERAD-dependent degrons for the endoplasmic reticulum lumen.内质网腔中内质网相关降解(ERAD)依赖性降解结构域的鉴定。
bioRxiv. 2024 Aug 5:2023.06.21.546000. doi: 10.1101/2023.06.21.546000.
6
MetaDegron: multimodal feature-integrated protein language model for predicting E3 ligase targeted degrons.MetaDegron:用于预测 E3 连接酶靶向降解结构域的多模态特征集成蛋白质语言模型。
Brief Bioinform. 2024 Sep 23;25(6). doi: 10.1093/bib/bbae519.
7
Protein quality control degron-containing substrates are differentially targeted in the cytoplasm and nucleus by ubiquitin ligases.含蛋白质量控制 degron 的底物通过泛素连接酶在细胞质和细胞核中被靶向。
Genetics. 2021 Mar 3;217(1):1-19. doi: 10.1093/genetics/iyaa031.
8
Design Principles Involving Protein Disorder Facilitate Specific Substrate Selection and Degradation by the Ubiquitin-Proteasome System.涉及蛋白质无序状态的设计原则有助于泛素-蛋白酶体系统进行特定底物的选择和降解。
J Biol Chem. 2016 Mar 25;291(13):6723-31. doi: 10.1074/jbc.R115.692665. Epub 2016 Feb 5.
9
A comparative analysis of the ubiquitination kinetics of multiple degrons to identify an ideal targeting sequence for a proteasome reporter.对多个降解子的泛素化动力学进行比较分析,以确定蛋白酶体报告基因的理想靶向序列。
PLoS One. 2013 Oct 29;8(10):e78082. doi: 10.1371/journal.pone.0078082. eCollection 2013.
10
The N-degron pathway: From basic science to therapeutic applications.N-连接肽降解途径:从基础科学到治疗应用。
Biochim Biophys Acta Gene Regul Mech. 2023 Jun;1866(2):194934. doi: 10.1016/j.bbagrm.2023.194934. Epub 2023 Mar 28.

本文引用的文献

1
Recruitment to the Proteasome Is Necessary but Not Sufficient for Chemically Induced, Ubiquitin-Independent Degradation of Native Proteins.蛋白酶体的募集对于化学诱导的、不依赖泛素的天然蛋白质降解是必要的,但并不充分。
ACS Chem Biol. 2024 Nov 15;19(11):2323-2335. doi: 10.1021/acschembio.4c00422. Epub 2024 Oct 22.
2
Biochemical and Structural Consequences of NEDD8 Acetylation.NEDD8乙酰化的生化及结构后果
Chembiochem. 2024 Nov 18;25(22):e202400478. doi: 10.1002/cbic.202400478. Epub 2024 Sep 23.
3
Diversity of structure and function in Cullin E3 ligases.Cullin E3 连接酶的结构与功能多样性。
Curr Opin Struct Biol. 2024 Oct;88:102879. doi: 10.1016/j.sbi.2024.102879. Epub 2024 Jul 15.
4
Dipeptidyl peptidases and E3 ligases of N-degron pathways cooperate to regulate protein stability.二肽基肽酶和 N 降解途径的 E3 连接酶协同调节蛋白质稳定性。
J Cell Biol. 2024 Aug 5;223(8). doi: 10.1083/jcb.202311035. Epub 2024 Jun 14.
5
Probing the CRL4 interactions with MAGEA3 and CCT5 di-Glu C-terminal degrons.探究CRL4与MAGEA3和CCT5双谷氨酸C末端降解子的相互作用。
PNAS Nexus. 2024 Apr 10;3(4):pgae153. doi: 10.1093/pnasnexus/pgae153. eCollection 2024 Apr.
6
N-recognins UBR1 and UBR2 as central ER stress sensors in mammals.N-识别蛋白UBR1和UBR2是哺乳动物内质网应激的核心传感器。
Mol Cells. 2024 Jan;47(1):100001. doi: 10.1016/j.mocell.2023.12.001. Epub 2023 Dec 18.
7
Protein N-myristoylation plays a critical role in the mitochondrial localization of human mitochondrial complex I accessory subunit NDUFB7.蛋白质 N-豆蔻酰化在人线粒体复合物 I 辅助亚基 NDUFB7 的线粒体定位中起着关键作用。
Sci Rep. 2023 Dec 27;13(1):22991. doi: 10.1038/s41598-023-50390-z.
8
Defining E3 ligase-substrate relationships through multiplex CRISPR screening.通过多重 CRISPR 筛选定义 E3 连接酶-底物关系。
Nat Cell Biol. 2023 Oct;25(10):1535-1545. doi: 10.1038/s41556-023-01229-2. Epub 2023 Sep 21.
9
Interplay between TRIM7 and antiviral immunity.TRIM7 与抗病毒免疫的相互作用。
Front Cell Infect Microbiol. 2023 Aug 31;13:1256882. doi: 10.3389/fcimb.2023.1256882. eCollection 2023.
10
Discovery of a non-covalent ligand for Rpn-13, a therapeutic target for hematological cancers.发现一种针对血液系统癌症的治疗靶点 Rpn-13 的非共价配体。
Bioorg Med Chem Lett. 2023 Oct 15;95:129485. doi: 10.1016/j.bmcl.2023.129485. Epub 2023 Sep 14.