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使用MS2-ADAR1系统恢复G到A突变的转录本。

Restoration of G to A mutated transcripts using the MS2-ADAR1 system.

作者信息

Bhakta Sonali, Tsukahara Toshifumi

机构信息

Area of Bioscience and Biotechnology, School of Materials Science, Japan Advanced Institute of Science and Technology, Asahidai, Nomicity, Ishikawa, Japan; Department of Anatomy and Histology, Bangladesh Agricultural University, Mymensingh, Bangladesh.

Area of Bioscience and Biotechnology, School of Materials Science, Japan Advanced Institute of Science and Technology, Asahidai, Nomicity, Ishikawa, Japan.

出版信息

Methods Enzymol. 2025;710:229-240. doi: 10.1016/bs.mie.2024.11.031. Epub 2024 Dec 5.

DOI:10.1016/bs.mie.2024.11.031
PMID:39870447
Abstract

Site-directed RNA editing (SDRE) holds significant promise for treating genetic disorders resulting from point mutations. Gene therapy, for common genetic illnesses is becoming more popular and, although viable treatments for genetic disorders are scarce, stop codon mutation-related conditions may benefit from gene editing. Effective SDRE generally depends on introducing many guideRNA molecules relative to the target gene; however, large ratios cannot be achieved in the context of gene therapy applications. Gene-encoded information can be altered, and functionally diverse proteins produced from a single gene by restoration of point-mutated RNA molecules using SDRE. Adenosine deaminase acting on RNA (ADAR) is an RNA-editing enzyme, that can specifically convert adenosine (A) residues to inosines (I), which are translated as guanosine (G). MS2 system along with ADAR1 deaminase domain can target a particular A and repair G to A mutations. In this study, we used the RNA binding MS2 coat protein fused with the ADAR1 deaminase domain controlled by the CMV promoter, and a 19 bp guide RNA (complementary to the target mRNA sequence) engineered with 6 × MS2 stem-loops downstream or 1 × MS2 stem-loop (double MS2) on either side, controlled by the U6 promoter. When the EGFP TGG codon (tryptophan) was altered to an amber (TAG), opal (TGA), or ochre (TAA) stop codon, the modified ADAR1 deaminase domain could convert A-to-I (G) at the edited sites. It is anticipated that successful establishment of this technique will result in a new era in gene therapy, allowing remarkably efficient gene repair, even in vivo.

摘要

定点RNA编辑(SDRE)在治疗由点突变引起的遗传疾病方面具有重大前景。针对常见遗传疾病的基因治疗正变得越来越流行,尽管针对遗传疾病的可行治疗方法稀缺,但与终止密码子突变相关的病症可能会从基因编辑中受益。有效的SDRE通常取决于相对于靶基因引入许多引导RNA分子;然而,在基因治疗应用的背景下无法实现高比例。基因编码的信息可以被改变,并且通过使用SDRE恢复点突变的RNA分子,从单个基因产生功能多样的蛋白质。作用于RNA的腺苷脱氨酶(ADAR)是一种RNA编辑酶,它可以将腺苷(A)残基特异性地转化为肌苷(I),而肌苷在翻译时被识别为鸟苷(G)。MS2系统与ADAR1脱氨酶结构域一起可以靶向特定的A并修复G到A的突变。在本研究中,我们使用了与由CMV启动子控制的ADAR1脱氨酶结构域融合的RNA结合MS2外壳蛋白,以及由U6启动子控制的、在下游设计有6×MS2茎环或两侧各有1×MS2茎环(双MS2)的19bp引导RNA(与靶mRNA序列互补)。当EGFP的TGG密码子(色氨酸)被改变为琥珀色(TAG)、乳白(TGA)或赭石(TAA)终止密码子时,修饰后的ADAR1脱氨酶结构域可以在编辑位点将A转化为I(G)。预计这项技术的成功建立将开创基因治疗的新纪元,即使在体内也能实现高效的基因修复。

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