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基于生物信息学和分子对接技术的多囊卵巢综合征氧化应激相关生物标志物及抗氧化药物筛选

Screening of Oxidative Stress-related Biomarkers and Antioxidant Drugs for Polycystic Ovary Syndrome Based on Bioinformatics and Molecular Docking.

作者信息

Chen Lanhui, Li Tian, Xu Jialiang, Liao Siqi, Xu Haocheng, Li Kun, Ivanova Deyana, Si Yuewen, Zhang Xin, Zhang Jianning, Li Fangfang, Chen Xuemei, Wang Yingxiong, Xie Biao, Shi Dan, Wang Meijiao

机构信息

Department of Physiology, College of Basic Medicine, Chongqing Medical University, Chongqing, 400016, China.

Department of Reproductive Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, China.

出版信息

Reprod Sci. 2025 May;32(5):1644-1660. doi: 10.1007/s43032-025-01790-1. Epub 2025 Jan 28.

Abstract

Polycystic ovary syndrome (PCOS) is a prevalent endocrine and metabolic disorder affecting women of reproductive age. Oxidative stress (OS) is suggested to play a significant role in the development of PCOS. Using antioxidants to reduce OS and maintain a healthy balance in the body could be a novel treatment approach for PCOS. This study analyzed transcriptome data from the Gene Expression Omnibus database, focusing on genes associated with OS. By implementing two machine learning algorithms, three OS-related biomarkers-HMOX1, MMP9, and KLF2-were successfully identified. To evaluate the diagnostic potential of these biomarkers, a Logistic regression model was employed. Additionally, granulosa cells were collected from healthy individuals and infertile women with PCOS, and the reliability of HMOX1, MMP9, and KLF2 was verified by quantitative real-time PCR experiments. Furthermore, small molecule drugs targeting proteins encoded by genes HMOX1 and MMP9 were predicted through the Drug Signature Database. Molecular docking of drugs to proteins identified two antioxidants, butein and demethoxycurcumin, as potential candidates for PCOS therapy.

摘要

多囊卵巢综合征(PCOS)是一种影响育龄女性的常见内分泌和代谢紊乱疾病。氧化应激(OS)被认为在PCOS的发展中起重要作用。使用抗氧化剂来降低氧化应激并维持体内健康平衡可能是一种治疗PCOS的新方法。本研究分析了来自基因表达综合数据库的转录组数据,重点关注与氧化应激相关的基因。通过实施两种机器学习算法,成功鉴定出三种与氧化应激相关的生物标志物——血红素氧合酶1(HMOX1)、基质金属蛋白酶9(MMP9)和 Kruppel样因子2(KLF2)。为了评估这些生物标志物的诊断潜力,采用了逻辑回归模型。此外,从健康个体和患有PCOS的不孕女性中收集颗粒细胞,并通过定量实时PCR实验验证了HMOX1、MMP9和KLF2的可靠性。此外,通过药物特征数据库预测了靶向由基因HMOX1和MMP9编码的蛋白质的小分子药物。药物与蛋白质的分子对接确定了两种抗氧化剂,即毛地黄黄酮和去甲氧基姜黄素,作为PCOS治疗的潜在候选药物。

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