Tang Rongjun, Yao Qing, Zhang Ke, Yu Qingqing, Lou Jun, Li Lingdi
Thermotherapy Centre, Hangzhou Cancer Hospital, Hangzhou, China.
Radiotherapy Second Ward, Hangzhou Cancer Centre, Hangzhou, China.
Environ Toxicol. 2025 Mar;40(3):481-492. doi: 10.1002/tox.24265. Epub 2025 Jan 31.
BACKGROUND: Cervical squamous cell carcinoma (CSCC) threatens the body health of women worldwide. This study aimed to foster a new concept of prognostic indicator named cell death index (CDI). METHODS: RNA-seq and scRNA-seq datasets were downloaded from the GEO and TCGA database as the training and validation cohorts. Programmed cell death (PCD)-related gene signatures were obtained from published research. The construction of prognostic model was performed based on CDI value. Patients with CSCC were divided into high- and low-CDI groups. We explored the differences in overall survival time, immune infiltration, mutation status, and drug sensitivity between high and low CDI groups by R software. RESULTS: We constructed prognostic model to calculate the CDI value with 23 genes. Patients with high CDI have shorter survival time than those with low CDI. CDI was considered a risk factor compared to other characteristics. The nomogram model estimated overall survival (OS) at 1, 3, and 6 years, with age, Stage, and CDI, indicating the accuracy of the model in predicting 1-, 3-, and 6-year survival rates. CDI values were negatively correlated with most immune checkpoint genes. We measured the significant drug sensitivity of Mitoxantrone, Sabutoclax, Sepantronium bromide, Topotecan, BI-2536, and BMS-754807 between high- and low-CDI groups with significant correlation. CONCLUSION: This investigation constructed a novel effective prognostic indicator of CDI in patients with CSCC and identified potential genes associated with cell death that could be targeted for prognosis and treatment of CSCC.
背景:宫颈鳞状细胞癌(CSCC)威胁着全球女性的身体健康。本研究旨在提出一种名为细胞死亡指数(CDI)的预后指标新概念。 方法:从GEO和TCGA数据库下载RNA测序和单细胞RNA测序数据集作为训练和验证队列。程序性细胞死亡(PCD)相关基因特征从已发表的研究中获得。基于CDI值构建预后模型。将CSCC患者分为高CDI组和低CDI组。我们通过R软件探讨了高CDI组和低CDI组在总生存时间、免疫浸润、突变状态和药物敏感性方面的差异。 结果:我们构建了一个预后模型,用23个基因计算CDI值。高CDI患者的生存时间比低CDI患者短。与其他特征相比,CDI被认为是一个危险因素。列线图模型根据年龄、分期和CDI估计1年、3年和6年的总生存期(OS),表明该模型在预测1年、3年和6年生存率方面的准确性。CDI值与大多数免疫检查点基因呈负相关。我们测量了米托蒽醌、沙布妥卡克斯、溴化塞潘托铵、拓扑替康、BI-2536和BMS-754807在高CDI组和低CDI组之间具有显著相关性的显著药物敏感性。 结论:本研究构建了一种新的、有效的CSCC患者CDI预后指标,并确定了与细胞死亡相关的潜在基因,这些基因可作为CSCC预后和治疗的靶点。
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