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用于DNA和生物分子分析的纳米孔:诊断、基因组洞察、在能量转换和催化中的应用。

Nanopores for DNA and biomolecule analysis: Diagnostic, genomic insights, applications in energy conversion and catalysis.

作者信息

Sharma Pradakshina, Sana Tasmiya, Khatoon Shaheen, Naikoo Ubiad Mushtaq, Malhotra Nitesh, Hasnain Md Saquib, Nayak Amit Kumar, Narang Jagriti

机构信息

Department of Biotechnology, School of Chemical and Life Sciences, Jamia Hamdard, Hamdard Nagar, New Delhi, 110062, India.

Centre for Nanotechnology Research, Vellore Institute of Technology, Vellore, 632014, Tamil Nadu, India.

出版信息

Anal Biochem. 2025 Jun;701:115791. doi: 10.1016/j.ab.2025.115791. Epub 2025 Jan 31.

DOI:10.1016/j.ab.2025.115791
PMID:39894145
Abstract

Recently, nanopores have emerged as highly significant structures with broad applications in diverse scientific and technological fields. They can naturally occur in biological membranes or be artificially fabricated using advanced techniques. Recent advances in nanopore technology have revolutionized genomics by offering previously unheard-of capacities for deoxyribo nucleic acid (DNA) sequencing and analysis. These tiny pores allow individual molecules to be found more easily, allowing for real-time DNA analysis and providing currently unheard-of insights into genetics and diagnostics. By tracking alterations in electrical or ionic currents as biomolecules traverse the pore, nanopores make possible the real-time recognition of other biomolecules, like proteins, nucleic acids, and small molecules, eliminating the need for labeling. This label-free detection potential holds a huge promise in medical diagnostics, genotyping, environmental monitoring, etc. Nanopores have significantly improved DNA sequencing technology such as increment in read length, enabling researchers to sequence entire genomic regions, accuracy can be improved and recent updates have led to a reported increase in total DNA reads, demonstrating the technology's capacity for high-throughput applications via trapping individual DNA strands and monitoring the variations of ionic current as each nucleotide passes across the pore. Finally, nanopore sequencing is well-known as a novel and highly flexible technique for DNA analyses, which has a huge deal of promise in clinical diagnosis and genomics research. Hence, this review article comprehensively explains nanopores for DNA analysis and other biomolecules, their synthesis, and diverse applications.

摘要

最近,纳米孔已成为极具重要性的结构,在各种科学和技术领域有着广泛应用。它们可自然存在于生物膜中,也可通过先进技术人工制造。纳米孔技术的最新进展彻底改变了基因组学,为脱氧核糖核酸(DNA)测序和分析提供了前所未有的能力。这些微小的孔使单个分子更容易被发现,从而实现实时DNA分析,并为遗传学和诊断学提供了前所未有的见解。通过追踪生物分子穿过孔时电流或离子流的变化,纳米孔能够实时识别其他生物分子,如蛋白质、核酸和小分子,无需进行标记。这种无标记检测潜力在医学诊断、基因分型、环境监测等方面有着巨大的前景。纳米孔显著改进了DNA测序技术,如增加了读长,使研究人员能够对整个基因组区域进行测序,提高了准确性,并且最近的进展导致报道的总DNA读数增加,证明了该技术通过捕获单条DNA链并监测每个核苷酸穿过孔时离子流的变化来进行高通量应用的能力。最后,纳米孔测序作为一种用于DNA分析的新颖且高度灵活的技术而闻名,在临床诊断和基因组学研究中有着巨大的前景。因此,这篇综述文章全面解释了用于DNA分析和其他生物分子的纳米孔、它们的合成以及各种应用。

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Anal Biochem. 2025 Jun;701:115791. doi: 10.1016/j.ab.2025.115791. Epub 2025 Jan 31.
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