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用于同时、鉴别性和低阈值测定与多发性硬化症相关的两种微小RNA的分裂CRRNA精确辅助Cas12a扩展策略

Split crRNA Precisely Assisted Cas12a Expansion Strategy for Simultaneous, Discriminative, and Low-Threshold Determination of Two miRNAs Associated with Multiple Sclerosis.

作者信息

Xia Xinyi, Liang Zhigang, Xu Guanhong, Wei Fangdi, Yang Jing, Zhu Xiaolei, Zhou Chenglin, Ye Jun, Hu Qin, Zhao Zheng, Tang Ben Zhong, Cen Yao

机构信息

School of Pharmacy, Nanjing Medical University, Nanjing, Jiangsu 211166, China.

Northern Jiangsu Institute of Clinical Medicine, The Affiliated Huaian No. 1 People's Hospital of Nanjing Medical University, Huaian, Jiangsu 223300, China.

出版信息

Anal Chem. 2025 Feb 11;97(5):2873-2882. doi: 10.1021/acs.analchem.4c05388. Epub 2025 Feb 2.

DOI:10.1021/acs.analchem.4c05388
PMID:39894990
Abstract

Multiple sclerosis (MS) can proceed into secondary progressive MS accompanied by persistent neurological deterioration; therefore, accurate diagnosis of MS is of vital significance. Irregularities of microRNAs (miRNAs) expression have been observed in MS, so miRNAs have been evaluated as novel biomarkers and therapeutic targets. Herein, a new strategy named plit crRNA recisely ssisted as12a xpansion (SPACE) was developed for simultaneous, discriminative, and low-threshold determination of two MS-related miRNAs: miRNA-155 and miRNA-326. On the one hand, owing to the property that split crRNA could activate Cas12a, miRNAs were designed as the spacers of crRNA to combine with scaffold. These integrated crRNAs then recognized the activators, activating Cas12a and enabling RNA target identification. On the other hand, the SPACE strategy dexterously integrated the activator with reporter probe, and utilized Cas12a's -cleavage to achieve simultaneous detection and differential signal output for miRNA-155 and miRNA-326. Moreover, -cleavage with ultra-high efficiency was assembled in the SPACE strategy to achieve sensitive quantification of total miRNAs in blood samples at low thresholds. Overall, the diversified and integrated design of the SPACE strategy enabled simultaneous, discriminative, and low-threshold detection of dual MS-related miRNAs in one pot and one step, providing a reliable and accurate Cas12a detection tool for clinical low-threshold diagnosis.

摘要

多发性硬化症(MS)可进展为继发性进展型MS,并伴有持续性神经功能恶化;因此,准确诊断MS至关重要。在MS中已观察到微小RNA(miRNA)表达异常,因此miRNA已被评估为新型生物标志物和治疗靶点。在此,开发了一种名为plit crRNA精确辅助as12a扩增(SPACE)的新策略,用于同时、鉴别性和低阈值测定两种与MS相关的miRNA:miRNA-155和miRNA-326。一方面,由于分裂型crRNA能够激活Cas12a的特性,将miRNA设计为crRNA的间隔序列以与支架结合。这些整合后的crRNA随后识别激活剂,激活Cas12a并实现RNA靶标的鉴定。另一方面,SPACE策略巧妙地将激活剂与报告探针整合,并利用Cas12a的切割作用实现对miRNA-155和miRNA-326的同时检测和差异信号输出。此外,在SPACE策略中组装了超高效的切割作用,以在低阈值下实现对血样中总miRNA的灵敏定量。总体而言,SPACE策略的多样化和一体化设计能够在一步操作中实现对两种与MS相关的miRNA进行同时、鉴别性和低阈值检测,为临床低阈值诊断提供了一种可靠且准确的Cas12a检测工具。

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引用本文的文献

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Nucleic Acids Res. 2025 Jun 6;53(11). doi: 10.1093/nar/gkaf510.