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果园草(鸭茅)中ARF转录因子的全基因组综合分析:DgARF7在抗旱中的正向调控作用

Comprehensive genome-wide analysis of ARF transcription factors in orchardgrass (Dactylis glomerata): the positive regulatory role of DgARF7 in drought resistance.

作者信息

Wang Miaoli, Liu Wen, Feng Guangyan, Nie Gang, Yang Zhongfu, Hao Feixiang, Huang Linkai, Zhang Xinquan

机构信息

College of Grassland Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China.

出版信息

BMC Genomics. 2025 Feb 3;26(1):101. doi: 10.1186/s12864-025-11241-5.

Abstract

Auxin response factor (ARF), a transcription factor, is crucial in controlling growth, development, and response to environmental stress. Orchardgrass (Dactylis glomerata) is an economically significant, widely cultivated forage grass. However, information on the genome-wide information and functional characterization of ARFs in orchardgrass is limited. This study identified 27 ARF genes based on the orchardgrass genome database. These DgARFs were unevenly distributed across the seven orchardgrass chromosomes and clustered into four classes. Phylogenetic analysis with multispecies of ARF proteins indicated that the ARFs exhibit a relatively conserved evolutionary path. Focusing on hormone signaling responses, DgARF7 demonstrated a potential positive regulatory role in response to 3-indole acetic acid, methyl jasmonate, gibberellin, salicylic acid, and abscisic acid signals. Additionally, exposure to drought stress induced noticeable oscillatory changes in DgARF7 gene. Notably, DgARF7 enhanced drought tolerance through heterologous expression in yeast and overexpression in Arabidopsis. Overexpressed Arabidopsis lines of DgARF7 exhibited a markedly higher relative water content and superoxide dismutase activity, while the malondialdehyde content was significantly decreased compared to wild type under drought stress. DgARF7 also accelerated flowering time by inducing the flowering-related gene expression levels in Arabidopsis. This research provides important insights into the role of DgARF7 in orchardgrass and provides further understanding in molecular breeding.

摘要

生长素响应因子(ARF)作为一种转录因子,在控制生长、发育以及对环境胁迫的响应中起着至关重要的作用。鸭茅(Dactylis glomerata)是一种具有重要经济价值且广泛种植的牧草。然而,关于鸭茅中ARF基因的全基因组信息和功能特性的相关信息却很有限。本研究基于鸭茅基因组数据库鉴定出了27个ARF基因。这些DgARF基因在鸭茅的7条染色体上分布不均,并聚类为四类。对多种ARF蛋白进行的系统发育分析表明,ARF呈现出相对保守的进化路径。聚焦于激素信号响应,DgARF7在对3-吲哚乙酸、茉莉酸甲酯、赤霉素、水杨酸和脱落酸信号的响应中显示出潜在的正向调节作用。此外,干旱胁迫处理诱导了DgARF7基因明显的振荡变化。值得注意的是,DgARF7通过在酵母中的异源表达和在拟南芥中的过表达增强了耐旱性。在干旱胁迫下,过表达DgARF7的拟南芥株系表现出明显更高的相对含水量和超氧化物歧化酶活性,而丙二醛含量与野生型相比显著降低。DgARF7还通过诱导拟南芥中与开花相关的基因表达水平来加速开花时间。本研究为DgARF7在鸭茅中的作用提供了重要见解,并为分子育种提供了进一步的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f6a/11792575/534b60bdd88e/12864_2025_11241_Fig1_HTML.jpg

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