Kong Fanyong, Han Boxuan, Wu Zhen, Chen Jiaming, Shen Xixi, Shi Qian, Hou Lizhen, Fang Jugao, Lian Meng
Department of Otorhinolaryngology, Beijing Shunyi District Hospital, Shunyi Teaching Hospital of Capital Medical University, Beijing, China.
Department of Otorhinolaryngology Head and Neck Surgery, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
PLoS One. 2025 Feb 10;20(2):e0318747. doi: 10.1371/journal.pone.0318747. eCollection 2025.
To explore the potential influence of Sjogren's syndrome (SS) on thyroid cancer (TC).
First, a literature data mining (LDM) approach was used to reconstruct functional pathways connecting SS and TC. A meta-analysis was then performed to examine the expression changes of genes mediated by SS using 16 TC case/control expression datasets, with results validated through the TCGA/GTEx dataset. Finally, gene set enrichment analysis (GSEA) and survival analysis using GEPIA2 were conducted on the significant genes.
Our findings indicate that SS may increase the risk of TC by activating 14 TC promoters (PDCD1, NTRK1, LGALS3, CD274, FOXP3, BCL2, CYP1A1, HMGB1, TGFB1, CCL2, PLA2G7, TFF3, LCN2, and CLDN1) and suppressing three TC inhibitors (MIR145, MIR30C1, and EP300). Four molecules (PLA2G7, TFF3, LCN2, and CLDN1) exhibited significant expression changes in TC patients (LFC > 1 or < -1; p < 2.07E-04), which were confirmed in TCGA/GTEx expression analysis. These results highlight three possible mechanisms-the SS-PLA2G7-CCL2-TC pathway, the SS-LCN2-LGALS3-TC pathway, and the SS-CLDN1-BCL2-TC pathway-that may explain how SS contributes to TC development. Enrichment analysis suggests that SS may affect TC prognosis by regulating leukocytes and tolerance induction. Survival analysis indicates that SS may enhance TC survival through the regulation of the CLDN1 and EGF pathways.
LDM-based pathway analysis highlighted three genetic pathways through which SS may adversely affect TC progression, while SS may enhance TC survival via the CLDN1 and EGF pathways, highlighting the need for further research.
探讨干燥综合征(SS)对甲状腺癌(TC)的潜在影响。
首先,采用文献数据挖掘(LDM)方法重建连接SS和TC的功能通路。然后进行荟萃分析,使用16个TC病例/对照表达数据集检查由SS介导的基因表达变化,并通过TCGA/GTEx数据集验证结果。最后,对显著基因进行基因集富集分析(GSEA)和使用GEPIA2的生存分析。
我们的研究结果表明,SS可能通过激活14个TC启动子(PDCD1、NTRK1、LGALS3、CD274、FOXP3、BCL2、CYP1A1、HMGB1、TGFB1、CCL2、PLA2G7、TFF3、LCN2和CLDN1)并抑制3个TC抑制剂(MIR145、MIR30C1和EP300)来增加TC风险。4种分子(PLA2G7、TFF3、LCN2和CLDN1)在TC患者中表现出显著的表达变化(LFC>1或<-1;p<2.07E-04),这在TCGA/GTEx表达分析中得到证实。这些结果突出了三种可能的机制——SS-PLA2G7-CCL2-TC通路、SS-LCN2-LGALS3-TC通路和SS-CLDN1-BCL2-TC通路——这可能解释了SS如何促进TC的发展。富集分析表明,SS可能通过调节白细胞和耐受诱导来影响TC预后。生存分析表明,SS可能通过调节CLDN1和EGF通路来提高TC生存率。
基于LDM的通路分析突出了SS可能对TC进展产生不利影响的三种遗传通路,而SS可能通过CLDN1和EGF通路提高TC生存率,这突出了进一步研究的必要性。