Gao Yun-Hang, Li Han, Li Jian-Liang, Song Ling, Chen Teng-Fei, Hou Hong-Ping, Peng Bo, Li Peng, Zhang Guang-Ping
Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences Beijing 100700, China.
Hebei Yuzhilin Biotechnology Co., Ltd. Shijiazhuang 050000, China.
Zhongguo Zhong Yao Za Zhi. 2025 Jan;50(2):515-526. doi: 10.19540/j.cnki.cjcmm.20241017.201.
This study aimed to explore the pharmacological mechanism of Yourenji Capsules(YRJ) in improving osteoporosis by combining network pharmacology and proteomics technologies. The SD rats were randomly divided into a blank control group and a 700 mg·kg(-1) YRJ group. The rats were subjected to gavage administration with the corresponding drugs, and the blank serum, drug-containing serum, and YRJ samples were compared using ultra performance liquid chromatography-quadrupole time-of-flight tandem mass spectrometry(UPLC-Q-TOF-MS/MS) to analyze the main components absorbed into blood. Network pharmacology analysis was conducted based on the YRJ components absorbed into blood to obtain related targets of the components and target genes involved in osteoporosis, and Venn diagrams were used to identify the intersection of drug action targets and disease targets. The STRING database was used for protein-protein interaction(PPI) network analysis of potential target proteins to construct a PPI network. Gene Ontology(GO) functional enrichment and Kyoto Encyclopedia of Genes and Genomes(KEGG) pathway enrichment were performed using Enrichr to investigate the potential mechanism of action of YRJ. Ovariectomy(OVX) was performed to establish a rat model of osteoporosis, and the rats were divided into a sham group, a model group, and a 700 mg·kg(-1) YRJ group. The rats were given the corresponding drugs by gavage. The femurs of the rats were subjected to label-free proteomics analysis to detect differentially expressed proteins, and GO functional enrichment and KEGG pathway enrichment analyses were performed on the differentially expressed proteins. With the help of network pharmacology and proteomics results, the mechanism by which YRJ improves osteoporosis was predicted. The analysis of the YRJ components absorbed into blood revealed 23 bioactive components of YRJ, and network pharmacology results indicated that key targets involved include tumor necrosis factor(TNF), tumor protein p53(TP53), protein kinase(AKT1), and matrix metalloproteinase 9(MMP9). These targets are mainly involved in osteoclast differentiation, estrogen signaling pathways, and nuclear factor-kappa B(NF-κB) signaling pathways. Additionally, the proteomics analysis highlighted important pathways such as peroxisome proliferator-activated receptor(PPAR) signaling pathways, mitogen-activated protein kinase(MAPK) signaling pathways, and β-alanine metabolism. The combined approaches of network pharmacology and proteomics have revealed that the mechanism by which YRJ improves osteoporosis may be closely related to the regulation of inflammation, osteoblast, and osteoclast metabolic pathways. The main pathways involved include the NF-κB signaling pathways, MAPK signaling pathways, and PPAR signaling pathways, among others.
本研究旨在通过结合网络药理学和蛋白质组学技术,探索右归丸(YRJ)改善骨质疏松症的药理机制。将SD大鼠随机分为空白对照组和700mg·kg⁻¹右归丸组。对大鼠进行相应药物的灌胃给药,使用超高效液相色谱-四极杆飞行时间串联质谱(UPLC-Q-TOF-MS/MS)比较空白血清、含药血清和右归丸样品,以分析吸收入血的主要成分。基于吸收入血的右归丸成分进行网络药理学分析,获得成分的相关靶点以及骨质疏松症涉及的靶基因,并用维恩图确定药物作用靶点与疾病靶点的交集。利用STRING数据库对潜在靶蛋白进行蛋白质-蛋白质相互作用(PPI)网络分析,构建PPI网络。使用Enrichr进行基因本体论(GO)功能富集和京都基因与基因组百科全书(KEGG)通路富集,以研究右归丸的潜在作用机制。进行卵巢切除术(OVX)建立大鼠骨质疏松症模型,并将大鼠分为假手术组、模型组和700mg·kg⁻¹右归丸组。对大鼠进行相应药物的灌胃给药。对大鼠股骨进行无标记蛋白质组学分析以检测差异表达蛋白,并对差异表达蛋白进行GO功能富集和KEGG通路富集分析。借助网络药理学和蛋白质组学结果,预测右归丸改善骨质疏松症的机制。对吸收入血的右归丸成分分析揭示了右归丸的23种生物活性成分,网络药理学结果表明涉及的关键靶点包括肿瘤坏死因子(TNF)、肿瘤蛋白p53(TP53)、蛋白激酶(AKT1)和基质金属蛋白酶9(MMP9)。这些靶点主要参与破骨细胞分化、雌激素信号通路和核因子-κB(NF-κB)信号通路。此外,蛋白质组学分析突出了过氧化物酶体增殖物激活受体(PPAR)信号通路、丝裂原活化蛋白激酶(MAPK)信号通路和β-丙氨酸代谢等重要通路。网络药理学和蛋白质组学的联合方法表明,右归丸改善骨质疏松症的机制可能与炎症、成骨细胞和破骨细胞代谢途径的调节密切相关。涉及的主要通路包括NF-κB信号通路、MAPK信号通路和PPAR信号通路等。