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从韩国非综合征性牙齿发育不全儿童中分离出的外显子和内含子变异体。

Exonic and Intronic Variants Isolated from Korean Children with Non-Syndromic Tooth Agenesis.

作者信息

Ju Yeonjin, Lee Joo Yeon, Hwang Woochang, Shin Jonghyun, Kim Hyung-Sik, Hur Junho K, Lee Eungyung

机构信息

Department of Pediatric Dentistry, School of Dentistry, Dental and Life Science Institute, Pusan National University, Yangsan 50612, Republic of Korea.

Department of Pediatric Dentistry, Dental Research Institute, Pusan National University Dental Hospital, Yangsan 50612, Republic of Korea.

出版信息

Diagnostics (Basel). 2025 Jan 28;15(3):310. doi: 10.3390/diagnostics15030310.

DOI:10.3390/diagnostics15030310
PMID:39941240
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11817635/
Abstract

: Tooth agenesis (TA) is a developmental anomaly prevalent in humans. It is particularly significant in children and adolescents because it is related to esthetic, physiological, and functional problems, including malocclusion, periodontal damage, and insufficient alveolar growth. mutations have been identified as the main genetic alterations associated with tooth agenesis. Most previous studies have investigated mutations in patients with tooth agenesis using single nucleotide polymorphism (SNP) arrays or exome sequencing. In this study, we conducted a comprehensive profiling of mutations within the exons and introns of in Korean patients with non-syndromic tooth agenesis. : Saliva samples were collected from Korean children and adolescents with non-syndromic tooth agenesis. Tagmentation-based sequencing was conducted to acquire mutation information for all exonic and intronic bases of the gene. : Mutations were detected exclusively in the patient samples: 629C>G and 1100C>T in exon 1, 1977T>C in intron 1, 10256C>T and 10382G>A in exon 3, and 15953G>A in intron 4. Additional mutations were also observed at high ratios in the patient samples. : The mutations identified in this study differ from previous findings. These results may provide useful information for understanding the pathogenicity of mutations in Korean patients with tooth agenesis and support future diagnostic and therapeutic approaches.

摘要

牙齿发育不全(TA)是一种在人类中普遍存在的发育异常。它在儿童和青少年中尤为显著,因为它与美学、生理和功能问题相关,包括错牙合、牙周损伤和牙槽骨生长不足。已确定突变是与牙齿发育不全相关的主要基因改变。以前的大多数研究使用单核苷酸多态性(SNP)阵列或外显子组测序来研究牙齿发育不全患者的突变。在本研究中,我们对韩国非综合征性牙齿发育不全患者的该基因外显子和内含子中的突变进行了全面分析。:从韩国非综合征性牙齿发育不全的儿童和青少年中收集唾液样本。进行基于转座酶标签的测序以获取该基因所有外显子和内含子碱基的突变信息。:仅在患者样本中检测到突变:外显子1中的629C>G和1100C>T、内含子1中的1977T>C、外显子3中的10256C>T和10382G>A以及内含子4中的15953G>A。在患者样本中也以高比例观察到其他突变。:本研究中鉴定的突变与先前的发现不同。这些结果可能为理解韩国牙齿发育不全患者中该基因突变的致病性提供有用信息,并支持未来的诊断和治疗方法。

相似文献

1
Exonic and Intronic Variants Isolated from Korean Children with Non-Syndromic Tooth Agenesis.从韩国非综合征性牙齿发育不全儿童中分离出的外显子和内含子变异体。
Diagnostics (Basel). 2025 Jan 28;15(3):310. doi: 10.3390/diagnostics15030310.
2
WNT10A variants are associated with non-syndromic tooth agenesis in the general population.WNT10A 变异与普通人群中非综合征性牙齿缺失有关。
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Involvement of and interaction between WNT10A and EDA mutations in tooth agenesis cases in the Chinese population.中国人牙齿缺失病例中 WNT10A 和 EDA 突变的参与和相互作用。
PLoS One. 2013 Nov 27;8(11):e80393. doi: 10.1371/journal.pone.0080393. eCollection 2013.
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WNT10A mutation results in severe tooth agenesis in a family of three sisters.WNT10A基因突变导致一个三姐妹家庭出现严重牙齿发育不全。
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WNT10A and RUNX2 mutations associated with non-syndromic tooth agenesis.与非综合征性牙齿发育不全相关的WNT10A和RUNX2突变。
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The WNT10A gene in ectodermal dysplasias and selective tooth agenesis.外胚层发育不良和选择性牙齿缺失中的WNT10A基因。
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本文引用的文献

1
PDIVAS: Pathogenicity predictor for Deep-Intronic Variants causing Aberrant Splicing.PDIVAS:导致异常剪接的深内含子变异体的致病性预测因子。
BMC Genomics. 2023 Oct 10;24(1):601. doi: 10.1186/s12864-023-09645-2.
2
The EDA/EDAR/NF-κB pathway in non-syndromic tooth agenesis: A genetic perspective.非综合征性牙齿发育不全中的EDA/EDAR/NF-κB信号通路:遗传学视角
Front Genet. 2023 Apr 3;14:1168538. doi: 10.3389/fgene.2023.1168538. eCollection 2023.
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MSX1 involved selective tooth agenesis and abnormal labial frenum, pedigree, and retrospective study.MSX1 涉及选择性牙齿缺失和唇系带异常、家系和回顾性研究。
Oral Dis. 2023 Nov;29(8):3168-3172. doi: 10.1111/odi.14459. Epub 2022 Dec 20.
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A novel EDAR variant identified in non-syndromic tooth agenesis: Insights from molecular dynamics.在非综合征性牙齿发育不全中鉴定出的一种新型EDAR变体:来自分子动力学的见解。
Arch Oral Biol. 2023 Feb;146:105600. doi: 10.1016/j.archoralbio.2022.105600. Epub 2022 Dec 1.
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Synergistic Mutations of and in Familial Tooth Agenesis.家族性牙齿发育不全中[基因名称缺失]和[基因名称缺失]的协同突变
J Pers Med. 2021 Nov 17;11(11):1217. doi: 10.3390/jpm11111217.
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Prevalence and patterns of tooth agenesis among patients aged 12-22 years: A retrospective study.12至22岁患者牙齿发育不全的患病率及模式:一项回顾性研究。
Korean J Orthod. 2021 Sep 25;51(5):355-362. doi: 10.4041/kjod.2021.51.5.355.
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Novel MSX1 frameshift mutation in a Japanese family with nonsyndromic oligodontia.一个患有非综合征性少牙症的日本家庭中的新型MSX1移码突变。
Hum Genome Var. 2021 Jul 20;8(1):29. doi: 10.1038/s41439-021-00161-x.
8
A novel EDAR missense mutation identified by whole-exome sequencing with non-syndromic tooth agenesis in a Chinese family.全外显子测序发现一个新的 EDAR 错义突变与一个中国家族的非综合征性牙齿缺失有关。
Mol Genet Genomic Med. 2021 Jun;9(6):e1684. doi: 10.1002/mgg3.1684. Epub 2021 May 4.
9
Targeted next-generation sequencing (NGS) analysis of mutations in nonsyndromic tooth agenesis candidate genes : Analysis of a Turkish cohort.非综合征性牙齿发育不全候选基因突变的靶向新一代测序(NGS)分析:土耳其队列研究
J Orofac Orthop. 2022 Oct;83(Suppl 1):65-74. doi: 10.1007/s00056-021-00284-4. Epub 2021 Mar 16.
10
Novel TSPEAR mutations in non-syndromic oligodontia.非综合征性少牙症中的新型TSPEAR突变。
Oral Dis. 2020 May;26(4):847-849. doi: 10.1111/odi.13316. Epub 2020 Mar 19.