Gibson Savannah E R, Frost Isabella, Hierons Stephen J, Moses Tessa, Poon Wilson C K, West Stuart A, Cann Martin J
Department of Biosciences, Durham University, South Road, Durham, DH1 3LE, UK.
EdinOmics, RRID:SCR_021838, School of Biological Sciences, The University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF, UK.
Nat Commun. 2025 Feb 13;16(1):1400. doi: 10.1038/s41467-025-56761-6.
Bacterial death is critical in nutrient recycling. However, the underlying mechanisms that permit macromolecule recycling after bacterial death are largely unknown. We demonstrate that bacteria encode post-mortem protein catabolism via Lon protease released from the dead bacteria. Growth assays reveal that the lysate of Lon protease-null bacteria does not provide a growth benefit to wild type cells. This deficiency is reversed with exogenous recombinant Lon protease, confirming its post-mortem role and is independent of Lon ATPase activity. Biochemistry, growth assays and metabolomics demonstrate that Lon protease facilitates peptide nutrient release, benefitting living cells and acting as a cooperative public good. We also show that the production of Lon protease cannot be explained by a personal benefit to living cells. Although Lon protease can also provide a benefit to living cells under stressful conditions by helping control protein quality, this private benefit does not outweigh the cost under the conditions examined. These results suggest that Lon protease represents a post-mortem adaptation that can potentially be explained by considering the post-mortem indirect benefit to other cells (kin selection). This discovery highlights an unexpected post-mortem biochemistry, reshaping our understanding of nutrient recycling.
细菌死亡在养分循环中至关重要。然而,细菌死亡后允许大分子循环利用的潜在机制在很大程度上尚不清楚。我们证明,细菌通过从死细菌中释放的Lon蛋白酶编码死后蛋白质分解代谢。生长试验表明,Lon蛋白酶缺失细菌的裂解物对野生型细胞没有生长促进作用。外源性重组Lon蛋白酶可逆转这种缺陷,证实了其死后作用,且该作用独立于Lon ATP酶活性。生物化学、生长试验和代谢组学表明,Lon蛋白酶促进肽类养分释放,使活细胞受益,并作为一种合作性公共物品发挥作用。我们还表明,Lon蛋白酶的产生不能用对活细胞的个人利益来解释。虽然Lon蛋白酶在应激条件下也可以通过帮助控制蛋白质质量使活细胞受益,但在所研究的条件下,这种私利并不超过成本。这些结果表明,Lon蛋白酶代表了一种死后适应性,这可能可以通过考虑对其他细胞的死后间接利益(亲缘选择)来解释。这一发现突出了一种意想不到的死后生物化学,重塑了我们对养分循环的理解。