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影响不同养殖模式下藏系阿旺绵羊肠道细菌动态变化的饮食和环境因素

Dietary and environmental factors affecting the dynamics of the gut bacteria in Tibetan Awang sheep () across divergent breeding models.

作者信息

Wang Yuhao, Wang Xinping, Wang Yirong, Liao Songyu, Pubu Zhaxi, Silang Jiangcuo, Chai Lixu, Zhao Siyue

机构信息

College of Water Conservancy and Hydropower, Sichuan Agricultural University, Ya'an, Sichuan, China.

Xizang Changdu Animal Husbandry Station, Changdu, Xizang, China.

出版信息

Front Microbiol. 2025 Feb 5;16:1502898. doi: 10.3389/fmicb.2025.1502898. eCollection 2025.


DOI:10.3389/fmicb.2025.1502898
PMID:40008045
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11852841/
Abstract

INTRODUCTION: Tibetan Awang sheep (), indigenous to the Qinghai-Tibet Plateau, are highly adapted to high-altitude environment. However, knowledge regarding their gut bacterial composition remains limited. METHODS: A comprehensive 16S rRNA highthroughput sequencing was performed on fecal samples from 15 Awang sheep under pure grazing, semi-captivity, and full captivity breeding models. RESULTS: Our results revealed that Firmicutes and Bacteroidetes were the most abundant bacterial phyla, while , , , , and were prevalent genera in the gut microbiota of Awang sheep. Meanwhile, the predominant presence of with increasing altitude of breeding locations indirectly demonstrates its crucial role in mediating energy acquisition among Awang sheep at high altitudes. Furthermore, PCoA and ANOSIM analysis exhibited significant differences in bacterial composition across all breeding models ( > 0.6, < 0.001). , , and were significantly abundant in the pure grazing breeding model, while and were more abundant in the semi-captivity breeding model. An abnormally high abundance of indicated a potential risk of infection in the fully captive group. The environmental association analysis exhibited that meadows diet ( = 0.938, Pr[>r] = 0.001) and altitude ( = 0.892, Pr[>r] = 0.001) had significant effects on the dominant genera, explaining a substantial proportion of the total variation in community composition. DISCUSSION: Our study indicated that breeding conditions significantly impact the gut microbiota of Awang sheep. The environmental association analysis underscores the importance of diet and altitude in shaping the gut microbiota of Awang sheep. The present findings provide insights into the microbiota dynamics of Awang sheep and offer guidance for their scientific husbandry management.

摘要

引言:西藏阿旺绵羊原产于青藏高原,对高海拔环境具有高度适应性。然而,关于其肠道细菌组成的知识仍然有限。 方法:对15只处于纯放牧、半圈养和全圈养繁殖模式下的阿旺绵羊的粪便样本进行了全面的16S rRNA高通量测序。 结果:我们的结果显示,厚壁菌门和拟杆菌门是最丰富的细菌门类,而[此处原文缺失部分属名]、[此处原文缺失部分属名]、[此处原文缺失部分属名]、[此处原文缺失部分属名]和[此处原文缺失部分属名]是阿旺绵羊肠道微生物群中的优势属。同时,随着繁殖地点海拔升高[此处原文缺失部分属名]的优势存在间接证明了其在介导高海拔阿旺绵羊能量获取中的关键作用。此外,主坐标分析(PCoA)和相似性分析(ANOSIM)表明,所有繁殖模式下的细菌组成存在显著差异(R > 0.6,P < 0.001)。[此处原文缺失部分属名]、[此处原文缺失部分属名]和[此处原文缺失部分属名]在纯放牧繁殖模式中显著丰富,而[此处原文缺失部分属名]和[此处原文缺失部分属名]在半圈养繁殖模式中更为丰富。[此处原文缺失部分属名]的异常高丰度表明全圈养组存在[此处原文缺失部分属名]感染的潜在风险。环境关联分析表明,草地饮食(r = 0.938,Pr[>r] = 0.001)和海拔(r = 0.892,Pr[>r] = 0.001)对优势属有显著影响,解释了群落组成总变异的很大一部分。 讨论:我们的研究表明,繁殖条件对阿旺绵羊的肠道微生物群有显著影响。环境关联分析强调了饮食和海拔在塑造阿旺绵羊肠道微生物群中的重要性。本研究结果为阿旺绵羊的微生物群动态提供了见解,并为其科学饲养管理提供了指导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/cedbc0bf8aaf/fmicb-16-1502898-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/b3a9b5bd73f9/fmicb-16-1502898-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/863e1ed4b4df/fmicb-16-1502898-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/65c52e7d4fe6/fmicb-16-1502898-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/ec142344bb27/fmicb-16-1502898-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/725c5f024835/fmicb-16-1502898-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/8d2142f21724/fmicb-16-1502898-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/1e5bbe41aa69/fmicb-16-1502898-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/afbccd2637ed/fmicb-16-1502898-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/075557f3fc96/fmicb-16-1502898-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/cedbc0bf8aaf/fmicb-16-1502898-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/b3a9b5bd73f9/fmicb-16-1502898-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/863e1ed4b4df/fmicb-16-1502898-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/65c52e7d4fe6/fmicb-16-1502898-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/ec142344bb27/fmicb-16-1502898-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/725c5f024835/fmicb-16-1502898-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/8d2142f21724/fmicb-16-1502898-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/1e5bbe41aa69/fmicb-16-1502898-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/afbccd2637ed/fmicb-16-1502898-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/075557f3fc96/fmicb-16-1502898-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/94cb/11852841/cedbc0bf8aaf/fmicb-16-1502898-g010.jpg

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本文引用的文献

[1]
Multi-omics reveal the gut microbiota-mediated severe foraging environment adaption of small wild ruminants in the Three-River-Source National Park, China.

Integr Zool. 2024-5-2

[2]
Effects of the alpine meadow in different phenological periods on rumen fermentation and gastrointestinal tract bacteria community in grazing yak on the Qinghai-Tibetan Plateau.

BMC Microbiol. 2024-2-19

[3]
Analysis of Rumen Degradation Characteristics, Attached Microbial Community, and Cellulase Activity Changes of Garlic Skin and Stalk.

Animals (Basel). 2024-1-4

[4]
Exploring the microbial diversity and characterization of cellulase and hemicellulase genes in goat rumen: a metagenomic approach.

BMC Biotechnol. 2023-12-4

[5]
Effects of different feeding patterns on the rumen bacterial community of tan lambs, based on high-throughput sequencing of 16S rRNA amplicons.

Front Microbiol. 2023-10-19

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Moderate altitude exposure impacts host fasting blood glucose and serum metabolome by regulation of the intestinal flora.

Sci Total Environ. 2023-12-20

[7]
Analysis of gut microbiota in chinese donkey in different regions using metagenomic sequencing.

BMC Genomics. 2023-9-5

[8]
Exploring the digesta- and mucosa-associated microbial community dynamics in the rumen and hindgut of goats from birth to adult.

Front Microbiol. 2023-6-15

[9]
Undernutrition Disrupts Cecal Microbiota and Epithelium Interactions, Epithelial Metabolism, and Immune Responses in a Pregnant Sheep Model.

Microbiol Spectr. 2023-3-28

[10]
Environmental factors and gut microbiota: Toward better conservation of deer species.

Front Microbiol. 2023-3-7

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