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将循环肿瘤DNA的全面基因组分析应用于实际:10个建议的用例。

Putting comprehensive genomic profiling of ctDNA to work: 10 proposed use cases.

作者信息

Desai Aakash, Pasquina Lincoln W, Nulsen Candice, Keller-Evans Rachel B, Mata Douglas A, Tukachinsky Hanna, Oxnard Geoffrey R

机构信息

Division of Hematology and Oncology, Department of Medicine, University of Alabama at Birmingham, AL, USA.

Foundation Medicine, Inc., Boston, MA, USA.

出版信息

J Liq Biopsy. 2024 Jan 17;4:100140. doi: 10.1016/j.jlb.2024.100140. eCollection 2024 Jun.

DOI:10.1016/j.jlb.2024.100140
PMID:40027147
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11863816/
Abstract

Liquid biopsy profiling of circulating tumor DNA (ctDNA) has become established as a compelling, pragmatic diagnostic in the care of cancer patients and is now endorsed by multiple cancer care guidelines. Moreover, ctDNA profiling technologies have advanced significantly and offer increasingly comprehensive and reliable insights into cancer. In this review, we focus on applications of ctDNA and propose that a critical untapped opportunity is in considering how we utilize these accessible, scalable technologies across diverse potential applications. With a specific focus on clinical applications, rather than research uses, we describe 10 use cases for ctDNA profiling across four categories: (1) established and (2) emerging applications of ctDNA profiling for therapy selection, (3) incidental detection of secondary genomic findings, and (4) quantification of plasma DNA tumor content.

摘要

循环肿瘤DNA(ctDNA)的液体活检分析已成为癌症患者护理中一种引人关注且实用的诊断方法,目前已得到多项癌症护理指南的认可。此外,ctDNA分析技术有了显著进步,能为癌症提供越来越全面且可靠的见解。在本综述中,我们聚焦于ctDNA的应用,并提出一个关键的未开发机会在于思考如何在各种潜在应用中利用这些易于获取、可扩展的技术。我们特别关注临床应用而非研究用途,描述了ctDNA分析在四个类别中的10个用例:(1)既定的,以及(2)ctDNA分析用于治疗选择的新兴应用,(3)次要基因组发现的偶然检测,以及(4)血浆DNA肿瘤含量的定量分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d7d/11863816/9fd78705758b/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d7d/11863816/775a48e1f867/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d7d/11863816/9fd78705758b/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d7d/11863816/775a48e1f867/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d7d/11863816/9fd78705758b/gr2.jpg

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本文引用的文献

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Liquid Biopsy Response Evaluation Criteria in Solid Tumors (LB-RECIST).液体活检实体瘤反应评估标准(LB-RECIST)。
Ann Oncol. 2024 Mar;35(3):267-275. doi: 10.1016/j.annonc.2023.12.007. Epub 2023 Dec 23.
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Circulating Tumor DNA Enables Sensitive Detection of Actionable Gene Fusions and Rearrangements Across Cancer Types.循环肿瘤 DNA 能够灵敏地检测多种癌症类型中的可操作基因融合和重排。
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ctDNA response after pembrolizumab in non-small cell lung cancer: phase 2 adaptive trial results.
帕博利珠单抗治疗非小细胞肺癌的 ctDNA 反应:2 期适应性试验结果。
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Circulating Tumor DNA Monitoring on Chemo-immunotherapy for Risk Stratification in Advanced Non-Small Cell Lung Cancer.循环肿瘤 DNA 监测在化疗免疫治疗中的应用:用于晚期非小细胞肺癌的风险分层。
Clin Cancer Res. 2023 Nov 14;29(22):4596-4605. doi: 10.1158/1078-0432.CCR-23-1578.
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Molecular residual disease detection in resected, muscle-invasive urothelial cancer with a tissue-based comprehensive genomic profiling-informed personalized monitoring assay.采用基于组织的综合基因组分析指导的个性化监测检测方法,对切除的肌层浸润性尿路上皮癌进行分子残留病灶检测。
Front Oncol. 2023 Jul 31;13:1221718. doi: 10.3389/fonc.2023.1221718. eCollection 2023.
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