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七鳃鳗(雷氏七鳃鳗)中E2F转录因子的进化与功能特征

The evolution and functional characterization of transcription factors E2Fs in lamprey, Lethenteron reissneri.

作者信息

Du Xinyu, Lin Lin, Yu Yongcheng, Yang Ning, Gao Si, Guo Jinyang, Fang Lingling, Su Peng

机构信息

College of Life Sciences, Liaoning Normal University, Dalian, 116081, China; Lamprey Research Center, Liaoning Normal University, Dalian, 116081, China.

College of Life Sciences, Liaoning Normal University, Dalian, 116081, China; Lamprey Research Center, Liaoning Normal University, Dalian, 116081, China; Department of Gynaecology, The Second Hospital of Dalian Medical University, Dalian, Liaoning, 116001, China.

出版信息

Dev Comp Immunol. 2025 Mar;165:105348. doi: 10.1016/j.dci.2025.105348. Epub 2025 Mar 1.

Abstract

The E2 promoter binding factors (E2Fs) are a group of transcriptional regulators that govern the cell cycle and play crucial roles in various cellular physiological processes, including proliferation and embryonic development. In this study, we identified four homologous genes-Lr-E2F3, Lr-E2F4, Lr-E2F5, and Lr-E2F8-from the lamprey (Lethenteron reissneri) genome database. Phylogenetic tree analysis was conducted to elucidate the evolutionary relationships within the E2F family across different species. Furthermore, analyses of motifs, domains, gene structures, and 3D structures reinforced the conservation of the E2F family. Notably, synteny analysis revealed that the neighboring genes of the Lr-E2Fs exhibited greater diversity compared to those in jawed vertebrates. Activity assays indicated that Lr-E2Fs may be involved in lamprey innate immunity mediated by NF-кB. Additionally, morphological observations of embryos microinjected with Cas9/sgRNA demonstrated that E2F-deficient lamprey embryos displayed embryonic lethality, suggesting that Lr-E2Fs play a significant role in lamprey embryonic development. In summary, our research not only provides new insights into the evolution of Lr-E2Fs but also offers valuable clues regarding their functional roles.

摘要

E2启动子结合因子(E2Fs)是一组转录调节因子,它们调控细胞周期,并在包括增殖和胚胎发育在内的各种细胞生理过程中发挥关键作用。在本研究中,我们从七鳃鳗(Lethenteron reissneri)基因组数据库中鉴定出四个同源基因——Lr-E2F3、Lr-E2F4、Lr-E2F5和Lr-E2F8。进行了系统发育树分析,以阐明不同物种间E2F家族的进化关系。此外,对基序、结构域、基因结构和三维结构的分析强化了E2F家族的保守性。值得注意的是,共线性分析表明,与有颌脊椎动物相比,Lr-E2Fs的相邻基因表现出更大的多样性。活性分析表明,Lr-E2Fs可能参与由NF-кB介导的七鳃鳗先天免疫。此外,对注射了Cas9/sgRNA的胚胎进行的形态学观察表明,E2F缺陷型七鳃鳗胚胎表现出胚胎致死性,这表明Lr-E2Fs在七鳃鳗胚胎发育中起重要作用。总之,我们的研究不仅为Lr-E2Fs的进化提供了新见解,也为它们的功能作用提供了有价值的线索。

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