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通过红外多光子解离光谱和理论研究阐明腺嘌呤与卡铂和奥沙利铂抗癌药物的相互作用复合物

Encounter Complex of Adenine with Carboplatin and Oxaliplatin Anticancer Drugs Elucidated by IRMPD Spectroscopy and Theoretical Study.

作者信息

Chiavarino Barbara, Rotari Lucretia, Crestoni Maria Elisa, Corinti Davide, Scuderi Debora, Salpin Jean-Yves

机构信息

Dipartimento di Chimica e Tecnologie del Farmaco, Università di Roma "La Sapienza", P.le A. Moro 5, I-00185 Roma, ITALY.

Université Paris-Saclay, CNRS, Institut de Chimie-Physique, 91405 Orsay, France.

出版信息

Inorg Chem. 2025 Mar 17;64(10):4873-4883. doi: 10.1021/acs.inorgchem.4c04731. Epub 2025 Mar 6.

DOI:10.1021/acs.inorgchem.4c04731
PMID:40047801
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11920941/
Abstract

Ionic complexes containing the nucleobase adenine and either carboplatin (CarboPt) or oxaliplatin (OxaliPt) were generated in solution and subsequently studied in the gas phase by combining tandem mass spectrometry, infrared multiple photon dissociation (IRMPD) spectroscopy, and density functional theory (DFT) calculations. The protonated complexes of the general formula [Pt drug+H+adenine] were first analyzed by collision-induced dissociation (CID). Their CID mass spectra show only one fragment, corresponding to the loss of neutral adenine. The structure of these complexes was elucidated by comparing their IRMPD spectra recorded in the fingerprint and H-X stretching ranges with DFT-calculated IR spectra. Unexpectedly, the IRMPD spectra of both complexes were not consistent with the calculated vibrational spectra of structures characterized by direct platinum-adenine coordination. All spectroscopic evidence suggest that each sampled [Pt drug+H+adenine] ion population comprises multiple proton-bound complexes stabilized by hydrogen bonds between the drug carboxylate groups and protonated adenine. Interestingly, while calculations support an external binding scheme in protonated adenine-oxaliplatin complexes, in the case of carboplatin, a direct monodentate interaction of Pt with N1, N3, or N7 positions of adenine turns out to be energetically favored. This study adds further evidence of the intrinsic lower affinity of platinum for adenine relative to guanine.

摘要

含有核碱基腺嘌呤以及卡铂(CarboPt)或奥沙利铂(OxaliPt)的离子复合物在溶液中生成,随后通过串联质谱、红外多光子解离(IRMPD)光谱和密度泛函理论(DFT)计算在气相中进行研究。通式为[Pt药物 + H⁺ + 腺嘌呤]的质子化复合物首先通过碰撞诱导解离(CID)进行分析。它们的CID质谱仅显示一个碎片,对应于中性腺嘌呤的损失。通过将在指纹区和H - X伸缩区记录的IRMPD光谱与DFT计算的红外光谱进行比较,阐明了这些复合物的结构。出乎意料的是,两种复合物的IRMPD光谱与以直接铂 - 腺嘌呤配位为特征的结构的计算振动光谱不一致。所有光谱证据表明,每个采样的[Pt药物 + H⁺ + 腺嘌呤]离子群体包含多个通过药物羧酸根基团与质子化腺嘌呤之间的氢键稳定的质子结合复合物。有趣的是,虽然计算支持质子化腺嘌呤 - 奥沙利铂复合物中的外部结合方案,但在卡铂的情况下,铂与腺嘌呤的N1、N3或N7位置的直接单齿相互作用在能量上更有利。这项研究进一步证明了相对于鸟嘌呤,铂对腺嘌呤的内在亲和力较低这一观点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/155e0254c555/ic4c04731_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/3c4b3c843b8a/ic4c04731_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/763ce2932cf2/ic4c04731_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/8db0c9586669/ic4c04731_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/50b0aced6e05/ic4c04731_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/11f0f7c99758/ic4c04731_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/ff8ac5e48f45/ic4c04731_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/155e0254c555/ic4c04731_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/3c4b3c843b8a/ic4c04731_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/763ce2932cf2/ic4c04731_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/8db0c9586669/ic4c04731_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/50b0aced6e05/ic4c04731_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/11f0f7c99758/ic4c04731_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/ff8ac5e48f45/ic4c04731_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7871/11920941/155e0254c555/ic4c04731_0006.jpg

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本文引用的文献

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Elusive intermediates in cisplatin reaction with target amino acids: Platinum(II)-cysteine complexes assayed by IR ion spectroscopy and DFT calculations.顺铂与靶氨基酸反应中的中间产物难以捉摸:通过红外离子光谱和密度泛函理论计算测定铂(II)-半胱氨酸配合物。
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