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结核分枝杆菌中依赖S-腺苷甲硫氨酸的分枝菌酸合酶UmaA的晶体结构

Crystal structure of the S-adenosylmethionine-dependent mycolic acid synthase UmaA from Mycobacterium tuberculosis.

作者信息

Teng Sean, Wang Jie, Sroge Collin D, Abendroth Jan, Lorimer Donald D, Horanyi Peter S, Edwards Thomas E, Tillery Logan, Craig Justin K, Van Voorhis Wesley C, Myler Peter J, Smith Craig L

机构信息

Department of Biology, Washington University in St Louis, St Louis, MO 63134, USA.

UCB Biosciences, 7869 NE Day Road West, Bainbridge Island, WA 98102, USA.

出版信息

Acta Crystallogr F Struct Biol Commun. 2025 Apr 1;81(Pt 4):146-154. doi: 10.1107/S2053230X25001530. Epub 2025 Mar 10.

DOI:10.1107/S2053230X25001530
PMID:40059638
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11970121/
Abstract

Mycobacterium tuberculosis is a Gram-positive bacillus that causes tuberculosis and is a leading cause of mortality worldwide. This disease is a growing health threat due to the occurrence of multidrug resistance. Mycolic acids are essential for generating cell walls and their modification is important to the virulence and persistence of M. tuberculosis. A family of S-adenosylmethionine-dependent mycolic acid synthases modify mycolic acids and represent promising drug targets. UmaA is currently the least-understood member of this family. This paper describes the crystal structure of UmaA. UmaA is a monomer composed of two domains: a structurally conserved SAM-binding domain and a variable substrate-binding auxiliary domain. Fortuitously, our structure contains a nitrate in the active site, a structural mimic of carbonate, which is a known general base in cyclopropane-adding synthases. Further investigation indicated that the structure of the N-terminus is highly flexible. Finally, we have identified S-adenosyl-N-decyl-aminoethyl as a promising potential inhibitor.

摘要

结核分枝杆菌是一种革兰氏阳性杆菌,可导致结核病,是全球范围内主要的死亡原因之一。由于多重耐药性的出现,这种疾病对健康的威胁日益增加。分枝菌酸对于细胞壁的形成至关重要,其修饰对于结核分枝杆菌的毒力和持续性很重要。一类依赖S-腺苷甲硫氨酸的分枝菌酸合酶修饰分枝菌酸,是很有前景的药物靶点。UmaA是该家族目前了解最少的成员。本文描述了UmaA的晶体结构。UmaA是由两个结构域组成的单体:一个结构保守的SAM结合结构域和一个可变的底物结合辅助结构域。幸运的是,我们的结构在活性位点含有一个硝酸盐,它是碳酸盐的结构模拟物,而碳酸盐是环丙烷加成合酶中已知的通用碱。进一步研究表明,N端的结构高度灵活。最后,我们确定S-腺苷-N-癸基-氨乙基是一种有前景的潜在抑制剂。