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通过综合分子对接、分子动力学模拟和体外研究鉴定胡椒的潜在抗癌植物化学物质。

Identification of Potential Anticancer Phytochemicals of Piper chaba by Comprehensive Molecular Docking, Molecular Dynamics Simulation and In-Vitro Studies.

作者信息

Joshi Vibha, Bachhar Vishwajeet, Mishra Shashank Shekher, Shukla Ravi K, Kumar Neeraj, Duseja Manisha

机构信息

Department of Chemistry, Analytical Chemistry Lab, School of Physical Sciences, DIT University, Dehradun, India.

School of Pharmaceutical and Population Health Informatics, Faculty of Pharmacy, DIT University, Dehradun, India.

出版信息

Chem Biodivers. 2025 Mar 18:e202403269. doi: 10.1002/cbdv.202403269.

DOI:10.1002/cbdv.202403269
PMID:40101115
Abstract

Human colon cancer and prostate cancer are the most common malignancy globally. Despite the availability of many treatments, resistance to traditional medicines, such as chemotherapy and radiotherapy, remains a severe obstacle in cancer treatment. Hence, searching for new therapeutic options is of utmost priority. The present investigation evaluates the in-silico and in-vitro anticancer potential of phytochemicals of Piper chaba. The cytotoxicity results demonstrated that the plant extract exhibited significant anticancer activity, with IC values of 12.66 ± 0.25 µg/mL for HCT-116 and 19.49 ± 0.37 µg/mL for DU-145. Molecular docking and molecular dynamics simulations were performed to explore the interaction of potential drug targets with the phytochemicals. Subsequently, pharmacokinetic parameters calculations were performed to evaluate the drug-likeness. Piperine exhibits the highest binding affinity for vascular endothelial growth factor receptor-2 (VEGFR2) protein with a docking score of -9.71 kcal/mol. Sylvatine had a greater binding affinity for human epidermal growth factor receptor 3 (HER3) protein than the other phytochemicals. Isopiperine, chabamide, Piperlonguminine, Santamarine and Versalide only exhibited ligand activity for human IKK beta protein (inhibitor of kappa B kinase). Additionally, a principal component analysis was performed to strengthen the investigation's scope. These proposed phytochemicals are reported to possess potential VEGFR2, HER2 and human IKK beta inhibition. The best phytochemical hits have excellent binding affinity and hold a massive anticancer potential, opening up new avenues for prospective future investigations in cancer treatment.

摘要

人类结肠癌和前列腺癌是全球最常见的恶性肿瘤。尽管有多种治疗方法可用,但对传统药物(如化疗和放疗)的耐药性仍然是癌症治疗中的一个严重障碍。因此,寻找新的治疗选择是当务之急。本研究评估了荜茇植物化学物质的计算机模拟和体外抗癌潜力。细胞毒性结果表明,该植物提取物表现出显著的抗癌活性,对HCT-116的IC值为12.66±0.25μg/mL,对DU-145的IC值为19.49±0.37μg/mL。进行了分子对接和分子动力学模拟,以探索潜在药物靶点与植物化学物质的相互作用。随后,进行了药代动力学参数计算,以评估药物相似性。胡椒碱对血管内皮生长因子受体-2(VEGFR2)蛋白表现出最高的结合亲和力,对接分数为-9.71kcal/mol。与其他植物化学物质相比,西伐汀对人表皮生长因子受体3(HER3)蛋白具有更高的结合亲和力。异胡椒碱、荜茇酰胺、胡椒碱、圣塔马林和韦萨利德仅对人IKKβ蛋白(κB激酶抑制剂)表现出配体活性。此外,还进行了主成分分析,以扩大研究范围。据报道,这些提出的植物化学物质具有潜在的VEGFR2、HER2和人IKKβ抑制作用。最佳的植物化学命中物具有优异的结合亲和力,并具有巨大的抗癌潜力,为未来癌症治疗的前瞻性研究开辟了新途径。

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