Ashcraft Deborah, Pierre Jesse St, Davis Heather, Scariano Susan, Latsis Maria, Vortisch Royanne, Smith Samantha, Pankey George
Infectious Disease Translational Research, Ochsner Clinic Foundation, New Orleans, LA.
The University of Queensland Medical School, Ochsner Clinical School, New Orleans, LA.
Ochsner J. 2025 Spring;25(1):24-33. doi: 10.31486/toj.24.0101.
Early identification and antimicrobial susceptibility testing (AST) of bloodstream pathogens are important for promptly determining the appropriate therapy. Currently, positive blood culture results (identification and AST) are reported in 2 to 4 days. The T2Resistance (T2R) Panel (T2 Biosystems, Inc) uses DNA amplification with magnetic resonance from 3 mL of whole blood for direct detection of 13 antibiotic resistance genes: , , , , , , AmpC , A/B, and A/C. We compared the accuracy of T2R testing to AST for positive blood cultures.
This investigator-sponsored, single-center study prospectively enrolled 802 patients with a standard of care blood culture. Five hundred forty-seven patients had adequate blood for culture and T2R testing. Blood cultures with positive isolates were identified, and AST was performed. Blood samples with positive blood cultures were tested with the T2R Panel.
Blood cultures were positive for 58/547 (10.6%) patients. Contaminants (18/547 [3.3%]) were excluded. T2R testing results (n=31) showed 2 genes with 100% sensitivity; the remaining gram-negative resistance genes were not detected, so sensitivity could not accurately be determined. Specificity was 100% for the 16 gram-negative bacilli. Three enterococci and 2 showed 100% sensitivity/specificity. However, 10 coagulase-negative staphylococci showed 17% sensitivity/100% specificity. Antibiotic resistance genes identified were 2 , 2 A/C, and 1 A/B. T2R testing results were obtained in an average of 7 hours.
T2R testing is highly specific (100%) for the 13 antibiotic resistance genes on the panel. Sensitivity was 100% for the genes detected but was low (17%) for coagulase-negative staphylococci. T2R testing has the potential to diagnose certain antibiotic resistance genes from bacterial bloodstream infections in hours vs the days required for a positive blood culture with AST. Additional studies that include larger numbers of samples with antimicrobial resistance genes are needed.
血流病原体的早期识别和抗菌药物敏感性测试(AST)对于迅速确定合适的治疗方法很重要。目前,血培养阳性结果(鉴定和AST)在2至4天内报告。T2Resistance(T2R)检测板(T2 Biosystems公司)利用来自3毫升全血的磁共振DNA扩增技术直接检测13种抗生素耐药基因: 、 、 、 、 、 、AmpC 、A/B和A/C。我们比较了T2R检测与AST对血培养阳性结果的准确性。
这项由研究者发起的单中心研究前瞻性纳入了802例接受标准护理血培养的患者。547例患者有足够的血液用于培养和T2R检测。鉴定出血培养分离株阳性的样本,并进行AST检测。对血培养阳性的血样用T2R检测板进行检测。
547例患者中有58例(10.6%)血培养呈阳性。排除污染菌(18/547 [3.3%])。T2R检测结果(n = 31)显示2种 基因的敏感性为100%;其余革兰阴性菌耐药基因未检测到,因此无法准确确定敏感性。对于16株革兰阴性杆菌,特异性为100%。3株肠球菌和2株 显示出100%的敏感性/特异性。然而,10株凝固酶阴性葡萄球菌的敏感性为17%,特异性为100%。鉴定出的抗生素耐药基因有2种 、2种A/C和1种A/B。T2R检测结果平均在7小时内获得。
T2R检测对检测板上的13种抗生素耐药基因具有高度特异性(100%)。检测到的基因敏感性为100%,但凝固酶阴性葡萄球菌的敏感性较低(17%)。与通过AST获得血培养阳性结果所需的天数相比,T2R检测有潜力在数小时内诊断细菌血流感染中的某些抗生素耐药基因。需要开展更多研究,纳入更多带有抗菌药物耐药基因的样本。