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基于细胞周期的分子特征:癌症中合成致死性与非编码RNA相互作用

Cell Cycle-Based Molecular Features via Synthetic Lethality and Non-Coding RNA Interactions in Cancer.

作者信息

Xiong Shizheng, Jin Jiaming, Zhao Xinmiao, Zhao Yang, He Zhiheng, Guo Haochuan, Gong Chengjun, Yu Jiafeng, Guo Li, Liang Tingming

机构信息

State Key Laboratory of Flexible Electronics (LoFE) & Institute of Advanced Materials (IAM), Nanjing University of Posts and Telecommunications, Nanjing 210023, China.

Jiangsu Key Laboratory for Molecular and Medical Biotechnology, School of Life Science, Nanjing Normal University, Nanjing 210023, China.

出版信息

Genes (Basel). 2025 Mar 5;16(3):310. doi: 10.3390/genes16030310.

Abstract

BACKGROUND

The cell cycle, a critical and intricate biological process, comprises various phases, and its dysregulation plays a pivotal role in tumorigenesis and metastasis. The exploration of cell cycle-based molecular subtypes across pan-cancers, along with the application of synthetic lethality concepts, holds promise for advancing cancer therapies.

METHODS

A pan-cancer analysis was conducted to assess the cell cycle serves as a reliable signature for classifying molecular subtypes and to understand the potential clinical application of genes as potential drug targets based on synthetic lethality.

RESULTS

Molecular subtypes derived from cell cycle features in certain cancers, particularly kidney-related malignancies, exhibited distinct immune characteristics. Synthetic lethal interactions within the cell cycle pathway were common, with significant genetic interactions further identifying potential drug targets through the exploitation of genetic relationships with key driver genes. Additionally, miRNAs and lncRNAs may influence the cell cycle through miRNA:mRNA interactions and ceRNA networks, thereby enriching the genetic interaction landscape.

CONCLUSIONS

These findings suggest that the cell cycle pathway could serve as a promising molecular subtype signature to enhance cancer prognostication and offer potential targets for anticancer drug development through synthetic lethality.

摘要

背景

细胞周期是一个关键且复杂的生物学过程,由多个阶段组成,其失调在肿瘤发生和转移中起着关键作用。在泛癌中探索基于细胞周期的分子亚型,以及合成致死概念的应用,有望推动癌症治疗的发展。

方法

进行了一项泛癌分析,以评估细胞周期作为分类分子亚型的可靠标志物,并基于合成致死了解基因作为潜在药物靶点的潜在临床应用。

结果

某些癌症,特别是与肾脏相关的恶性肿瘤中,源自细胞周期特征的分子亚型表现出独特的免疫特征。细胞周期途径内的合成致死相互作用很常见,通过利用与关键驱动基因的遗传关系,显著的遗传相互作用进一步确定了潜在的药物靶点。此外,miRNA和lncRNA可能通过miRNA:mRNA相互作用和ceRNA网络影响细胞周期,从而丰富遗传相互作用格局。

结论

这些发现表明,细胞周期途径可作为一种有前景的分子亚型标志物,以改善癌症预后,并通过合成致死为抗癌药物开发提供潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/84d7/11941865/104d58910c77/genes-16-00310-g001.jpg

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