Lachén-Montes Mercedes, Cartas-Cejudo Paz, Anaya-Cubero Elena, Cortés Adriana, Fernández-Irigoyen Joaquín, Santamaría Enrique
Clinical Neuroproteomics Unit, Proteomics Platform, Navarrabiomed, Hospitalario Universitario de Navarra (HUN), Universidad Pública de Navarra (UPNA), IdiSNA, Navarra Institute for Health Research, Pamplona, Spain.
Methods Mol Biol. 2025;2914:261-273. doi: 10.1007/978-1-0716-4462-1_19.
Due to the increase in life expectancy, the prevalence of neurodegenerative diseases is estimated to grow considerably in the next decades. Unfortunately, there are no current curative treatments for the majority of these disorders and this might be due to the lack of early diagnosis. Nowadays, diagnosis of neurodegenerative disorders is mainly based on neuroimaging and clinical symptoms, although postmortem neuropathologic confirmation remains the gold-standard diagnostic technique. In this sense, cerebrospinal fluid (CSF) proteome is considered a valuable molecular repository for diagnosing and targeting the neurodegenerative process. On the other hand, olfactory dysfunction is an early symptom that affects Alzheimer's disease (AD) and other tauopathies' patients. That is why we consider that the application of tissue proteomics in primary olfactory structures is an ideal approach to explore early pathophysiological changes, detecting olfactory proteins that might be tested in CSF as potential biomarkers. In this chapter, we have applied peptide fractionation methods followed by tandem mass spectrometry (nanoLC-MS/MS), in silico analysis and semi-quantitative orthogonal techniques in the olfactory tract derived from AD subjects. After obtaining the differential OT proteome, we suggest that the use of different bioinformatic workflows might be a valuable workflow to discover potential disease biomarkers for AD and other tauopathies.
由于预期寿命的增加,预计在未来几十年神经退行性疾病的患病率将大幅上升。不幸的是,目前大多数这些疾病尚无治愈性治疗方法,这可能是由于缺乏早期诊断所致。如今,神经退行性疾病的诊断主要基于神经影像学和临床症状,尽管死后神经病理学确认仍是金标准诊断技术。从这个意义上讲,脑脊液(CSF)蛋白质组被认为是诊断和靶向神经退行性过程的有价值的分子库。另一方面,嗅觉功能障碍是影响阿尔茨海默病(AD)和其他tau蛋白病患者的早期症状。这就是为什么我们认为在初级嗅觉结构中应用组织蛋白质组学是探索早期病理生理变化、检测可能在脑脊液中作为潜在生物标志物进行检测的嗅觉蛋白的理想方法。在本章中,我们在源自AD受试者的嗅束中应用了肽分级分离方法,随后进行串联质谱分析(nanoLC-MS/MS)、计算机分析和半定量正交技术。在获得差异嗅束蛋白质组后,我们认为使用不同的生物信息学工作流程可能是发现AD和其他tau蛋白病潜在疾病生物标志物的有价值的工作流程。