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淀粉样蛋白重定向酶催化

Amyloid-reoriented enzyme catalysis.

作者信息

Sawazaki Taka, Murai Fuma, Yamamoto Kai, Sasaki Daisuke, Sohma Youhei

机构信息

Department of Medicinal Chemistry, School of Pharmaceutical Sciences, Wakayama Medical University, Wakayama, Japan.

出版信息

Nat Commun. 2025 Apr 2;16(1):3164. doi: 10.1038/s41467-025-58536-5.

Abstract

Enzyme catalysis is essential for molecular transformations. Here, we make use of amyloid, a fibrillar aggregate formed by stacking peptides with β-sheet, which offers unique selectivity in enzymatic reactions. Azo-stilbene derivative (ASB), the amyloid-recognition motif, is incorporated into the substrate, which allows the amyloid consisting of Bz-Phe-Phe-Ala-Ala-Leu-Leu-NH (BL7) to shield the substrates from the approaching enzyme. X-ray crystallographic analysis and structure-shielding effect relationship studies of BL7 reveal that the benzene rings present in the N-terminal benzoyl group and Phe1 side chain are particularly important for the shielding effect on the substrate. The finding results in a selective transformation system in which the reactive site close to ASB is protected by amyloid, while a site far from ASB is converted by the enzymes (trypsin, protein arginine deiminase [PAD], and Staphylococcus aureus V-8 Protease [Glu-C]). Further, the amyloid-shielded enzyme catalysis is compatible with an intact peptide, as the side chain of Tyr can be converted to the amyloid-recognizing motif. The enzymatic reactions combining amyloid provide unique selectivity for molecular transformation which may be used in diverse fields, including in synthetic chemistry.

摘要

酶催化对于分子转化至关重要。在此,我们利用淀粉样蛋白,一种由β-折叠肽堆叠形成的纤维状聚集体,其在酶促反应中具有独特的选择性。将淀粉样蛋白识别基序偶氮-二苯乙烯衍生物(ASB)引入底物中,这使得由Bz-Phe-Phe-Ala-Ala-Leu-Leu-NH(BL7)组成的淀粉样蛋白能够保护底物免受接近的酶的作用。BL7的X射线晶体学分析和结构屏蔽效应关系研究表明,N端苯甲酰基和Phe1侧链中存在的苯环对底物的屏蔽效应尤为重要。这一发现产生了一种选择性转化系统,其中靠近ASB的反应位点被淀粉样蛋白保护,而远离ASB的位点则被酶(胰蛋白酶、蛋白质精氨酸脱亚氨酶[PAD]和金黄色葡萄球菌V-8蛋白酶[Glu-C])转化。此外,淀粉样蛋白屏蔽的酶催化与完整肽兼容,因为酪氨酸的侧链可以转化为淀粉样蛋白识别基序。结合淀粉样蛋白的酶促反应为分子转化提供了独特的选择性,可用于包括合成化学在内的各种领域。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f68/11965455/68e57d8a22be/41467_2025_58536_Fig1_HTML.jpg

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