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一个动态蛋白质相互作用组驱动能量守恒和电子通量。 (你提供的原文不完整,句末缺少具体内容)

A dynamic protein interactome drives energy conservation and electron flux in .

作者信息

Williams Sere A, Riley Danielle M, Rockwood Teagan P, Crosby David A, Call Katherine D, LeCuyer Jared J, Santangelo Thomas J

机构信息

Graduate Program in Cell and Molecular Biology, Colorado State University, Fort Collins, Colorado, USA.

Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado, USA.

出版信息

Appl Environ Microbiol. 2025 Apr 23;91(4):e0029325. doi: 10.1128/aem.00293-25. Epub 2025 Apr 3.

Abstract

Life is supported by energy gains fueled by catabolism of a wide range of substrates, each reliant on the selective partitioning of electrons through redox (uction and idation) reactions. Electron flux through tunable and regulated protein interactions provides dynamic routes for energy conservation, but how electron flux is regulated , particularly for archaeal metabolisms that support rapid growth at the thermodynamic limits of life, is poorly understood. Identification of protein assemblies and how such assemblies dictate the totality of electron flux is critical to our understanding of the regulation imposed on metabolism, energy production, and energy conservation. Here, 25 key proteins in central metabolic redox pathways in the model, genetically accessible, hyperthermophilic archaeon , were purified to reveal an extensive, dynamic, and tightly interconnected network of protein interactions that responds to environmental cues (such as the availability of various reductive sinks) to direct electron flux to maximize energetic gains. Interactions connecting disparate functions suggest many catabolic and anabolic activities occur in spatial proximity , and while protein complexes have been historically defined under optimal conditions, many of these complexes appear to maintain alternative partnerships in changing conditions. The totality of the results obtained redefines our understanding of assemblies driving ancient metabolic strategies supporting the growth of modern Archaea.IMPORTANCEGiven the potential for rational genetic manipulations of biofuel- and biotech-promising archaea to yield transformative results for major markets, it is a priority to define how the metabolisms of such species are controlled, at least in part, by protein assemblies, and from such, define routes of energy flux that can be most efficiently altered toward biofuel or biotechnological gains. Proteinaceous electron carriers (PECs, such as ferredoxins) offer the potential for specific protein-protein interactions to coordinate selective reductive flow. Employing the model, genetically accessible, hyperthermophilic archaeon, , we establish the metabolic protein interactome of 25 key redox proteins, revealing that each redox active protein has a dynamic partnership profile, suggesting catabolic and anabolic activities may occur in concert and in temporal and spatial proximity . These results reveal critical importance in evaluating the newly identified partnerships and their role and utility in providing regulated redox flux in .

摘要

生命由多种底物分解代谢所产生的能量供应来维持,每种底物都依赖于通过氧化还原(还原和氧化)反应对电子进行选择性分配。通过可调节和受调控的蛋白质相互作用产生的电子流为能量守恒提供了动态途径,但是电子流是如何被调控的,尤其是对于那些在生命的热力学极限条件下支持快速生长的古菌代谢而言,目前还知之甚少。识别蛋白质组装体以及这些组装体如何决定电子流的整体情况,对于我们理解施加于代谢、能量产生和能量守恒的调控至关重要。在此,我们对模式生物、基因易于操作的嗜热古菌中心代谢氧化还原途径中的25种关键蛋白质进行了纯化,以揭示一个广泛、动态且紧密相连的蛋白质相互作用网络,该网络可响应环境线索(如各种还原受体的可用性)来引导电子流,从而使能量获取最大化。连接不同功能的相互作用表明,许多分解代谢和合成代谢活动在空间上较为接近,并且虽然蛋白质复合物在历史上是在最佳条件下定义的,但其中许多复合物在不断变化的条件下似乎维持着不同的伙伴关系。所获得的全部结果重新定义了我们对驱动支持现代古菌生长的古老代谢策略的组装体的理解。

重要性

鉴于对有生物燃料和生物技术应用前景的古菌进行合理基因操作有可能为主要市场带来变革性成果,因此优先任务是确定此类物种的代谢至少部分是如何由蛋白质组装体控制的,并据此确定能量流途径,这些途径可最有效地朝着生物燃料或生物技术应用进行改变。蛋白质电子载体(如铁氧化还原蛋白等蛋白质电子载体)为特定的蛋白质 - 蛋白质相互作用以协调选择性还原流提供了潜力。利用模式生物、基因易于操作的嗜热古菌,我们建立了25种关键氧化还原蛋白的代谢蛋白质相互作用组,揭示出每个氧化还原活性蛋白都有一个动态的伙伴关系图谱,这表明分解代谢和合成代谢活动可能会协同发生,并且在时间和空间上较为接近。这些结果揭示了评估新确定的伙伴关系及其在提供受调控的氧化还原流方面的作用和效用的至关重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1210/12016516/892e2b39babe/aem.00293-25.f001.jpg

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