多组学分析确定DLX4作为诊断、预后和免疫浸润的新型生物标志物:从泛癌到肾癌
Multi-omics analysis identifies DLX4 as a novel biomarker for diagnosis, prognosis, and immune infiltration: from pan-cancer to renal cancer.
作者信息
Kou Zengshun, Zhu Shuaizhi, Zhu Jiaxi, Wang Shufei, Zheng Yu, Zhou Shengjie, Si Zi'ang, Zhu Hai
机构信息
Department of Urology, Qingdao Municipal Hospital, Qingdao University, Qingdao, Shandong, China.
Qingdao Hospital, University of Health and Rehabilitation Sciences, Qingdao, China.
出版信息
Discov Oncol. 2025 Apr 5;16(1):467. doi: 10.1007/s12672-025-02258-z.
BACKGROUND
DLX4 is involved in the regulation of embryonic development, but its function in cancer remains unclear. Here, we conducted a pan-cancer analysis to investigate the molecular mechanisms of DLX4, with a particular emphasis on its role in renal cancer.
METHODS
A comprehensive analysis of DLX4 was performed, focusing on differences in expression, prognostic value, somatic mutations, methylation modifications, and immune landscapes across various cancer types using multiple databases. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses were utilized to explore the potential biological functions. Additionally, we evaluated the expression profile, prognostic significance, and immune infiltration of DLX4 in Kidney Renal Clear Cell Carcinoma (KIRC). The effect of DLX4 on KIRC was further validated by Spatial Transcriptomics, Real-time PCR (RT-PCR), and Immunohistochemistry experiments.
RESULTS
DLX4 was found to be upregulated in 26 cancer types and associated with poor prognosis. It was also correlated with tumor mutational burden (TMB), microsatellite instability, mismatch repair, and methylation, and was significantly enriched in pathways related to cell proliferation. In KIRC, DLX4 expression increased along with TMB and immune scores, likely due to the infiltration of regulatory T cells (Tregs) and T-helper 2 (Th2) cells. Spatial transcriptomics revealed a strong correlation between DLX4 localization and tumor cells. Experimental validation confirmed that DLX4 expression is significantly upregulated in renal cancer tissues.
CONCLUSION
Our study explored the mechanisms of DLX4 in pan-cancer, especially in renal clear cell carcinoma, identifying it as a promising biomarker and therapeutic target.
背景
DLX4参与胚胎发育的调控,但其在癌症中的功能尚不清楚。在此,我们进行了一项泛癌分析,以研究DLX4的分子机制,特别关注其在肾癌中的作用。
方法
使用多个数据库对DLX4进行了全面分析,重点关注不同癌症类型中其表达差异、预后价值、体细胞突变、甲基化修饰和免疫图谱。利用基因本体论和京都基因与基因组百科全书分析来探索潜在的生物学功能。此外,我们评估了DLX4在肾透明细胞癌(KIRC)中的表达谱、预后意义和免疫浸润情况。通过空间转录组学、实时定量聚合酶链反应(RT-PCR)和免疫组织化学实验进一步验证了DLX4对KIRC的影响。
结果
发现DLX4在26种癌症类型中上调,并与不良预后相关。它还与肿瘤突变负荷(TMB)、微卫星不稳定性、错配修复和甲基化相关,并且在与细胞增殖相关的通路中显著富集。在KIRC中,DLX4表达随TMB和免疫评分增加,这可能是由于调节性T细胞(Tregs)和辅助性T细胞2(Th2)的浸润所致。空间转录组学揭示了DLX4定位与肿瘤细胞之间的强相关性。实验验证证实了DLX4在肾癌组织中的表达显著上调。
结论
我们的研究探索了DLX4在泛癌中的机制,尤其是在肾透明细胞癌中,将其确定为一个有前景的生物标志物和治疗靶点。