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利用外阴和阴道恶性肿瘤的综合基因组分析数据研究肿瘤突变负荷:一项使用C-CAT数据库的观察性研究

Investigation of tumor mutation burden using the comprehensive genomic profiling data of vulvar and vaginal malignant tumors: an observational study using C-CAT database.

作者信息

Seino Manabu, Sano Shiori, Gonai Yuta, Horikawa Shota, Nakamura Fumihiro, Okui Yosuke, Matsukawa Jun, Sakaki Hirotsugu, Watanabe Norikazu, Yamauchi Keiko, Ohta Tsuyoshi, Hoshi Yuki, Suzuki Shuhei, Kawai Masaaki, Nagase Satoru

机构信息

Department of Obstetrics and Gynecology, Yamagata University Faculty of Medicine, 2-2-2 Iidanishi, Yamagata, 990-9585, Japan.

Genetic Counseling Unit, Yamagata University Hospital, Yamagata, Japan.

出版信息

Int J Clin Oncol. 2025 May;30(5):1033-1039. doi: 10.1007/s10147-025-02730-4. Epub 2025 Apr 7.

DOI:10.1007/s10147-025-02730-4
PMID:40192944
Abstract

BACKGROUND

This study aimed to reveal the gene alteration and tumor mutation burden (TMB) statuses of vulvar and vaginal malignant tumors in Japan.

METHODS

We investigated the cancer genomic profiling (CGP) data of 79 patients with vulvar and vaginal cancers. These data were obtained from the Center for Cancer Genomics and Advanced Therapeutics (C-CAT).

RESULTS

None of the patients had high microsatellite instability. Although 21.9% of the patients with vulvar and vaginal squamous cell carcinoma (SCC) had high TMB, those with other histological types did not. The top single-nucleotide variants (SNVs) in SCC were TERT, TP53, CDKN2A, KMT2D, and NOTCH1. The frequencies of ATRX and PBRM1 were significantly higher in TMB-high SCC than in non-TMB-high SCC.

CONCLUSION

SCC of the vulva and vagina is expected to have high TMB, and gene alteration status differed between TMB-high and non-TMB-high groups.

摘要

背景

本研究旨在揭示日本外阴和阴道恶性肿瘤的基因改变及肿瘤突变负荷(TMB)状态。

方法

我们调查了79例外阴和阴道癌患者的癌症基因组图谱(CGP)数据。这些数据来自癌症基因组学与先进治疗中心(C-CAT)。

结果

所有患者均无高度微卫星不稳定。虽然21.9%的外阴和阴道鳞状细胞癌(SCC)患者TMB较高,但其他组织学类型的患者并非如此。SCC中最常见的单核苷酸变异(SNV)是TERT、TP53、CDKN2A、KMT2D和NOTCH1。TMB高的SCC中ATRX和PBRM1的频率显著高于TMB不高的SCC。

结论

外阴和阴道SCC预计TMB较高,且TMB高和不高的组之间基因改变状态不同。

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本文引用的文献

1
Genomic profiles of Japanese patients with vulvar squamous cell carcinoma.日本外阴鳞癌患者的基因组图谱。
Sci Rep. 2024 Jun 6;14(1):13058. doi: 10.1038/s41598-024-63913-z.
2
Vulvar Cancer, Version 3.2024, NCCN Clinical Practice Guidelines in Oncology.外阴癌临床实践指南(第 3.2024 版),NCCN 肿瘤学临床实践指南
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Clinicopathological demographics of malignant melanomas of the vulva and vagina in Japan.日本外阴和阴道恶性黑色素瘤的临床病理人口统计学。
Melanoma Res. 2023 Aug 1;33(4):300-308. doi: 10.1097/CMR.0000000000000894. Epub 2023 May 26.
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C-CAT: The National Datacenter for Cancer Genomic Medicine in Japan.C-CAT:日本癌症基因组医学国家数据中心。
Cancer Discov. 2022 Nov 2;12(11):2509-2515. doi: 10.1158/2159-8290.CD-22-0417.
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The association of sex-biased ATRX mutation in female gastric cancer patients with enhanced immunotherapy-related anticancer immunity.女性胃癌患者中存在性别偏向性 ATRX 突变与增强免疫治疗相关抗癌免疫的关联。
BMC Cancer. 2021 Mar 7;21(1):240. doi: 10.1186/s12885-021-07978-3.
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Association of tumour mutational burden with outcomes in patients with advanced solid tumours treated with pembrolizumab: prospective biomarker analysis of the multicohort, open-label, phase 2 KEYNOTE-158 study.帕博利珠单抗治疗的晚期实体瘤患者肿瘤突变负荷与结局的相关性:多队列、开放标签、Ⅱ期 KEYNOTE-158 研究的前瞻性生物标志物分析。
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PD-L1 expression and tumor mutational burden are independent biomarkers in most cancers.PD-L1 表达和肿瘤突变负担是大多数癌症的独立生物标志物。
JCI Insight. 2019 Mar 21;4(6). doi: 10.1172/jci.insight.126908.
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Vulvar malignant melanoma: Pathogenesis, clinical behaviour and management: Review of the literature.外阴恶性黑色素瘤:发病机制、临床行为和治疗:文献复习。
Cancer Treat Rev. 2019 Feb;73:91-103. doi: 10.1016/j.ctrv.2018.12.005. Epub 2018 Dec 24.