Kącka-Zych Agnieszka, Zeroual Abdellah, Syed Asad, Bahkali Ali H
Department of Organic Chemistry and Technology, Cracow University of Technology, Cracow, Poland.
Molecular Modeling and Spectroscopy Research Team, Department of Chemistry, Faculty of Sciences, Chouaïb Doukkali University, El Jadida, Morocco.
J Comput Chem. 2025 Apr 15;46(10):e70092. doi: 10.1002/jcc.70092.
The Diels-Alder (DA) reaction between hexachlorocyclopentadiene and 1,2-dichloroethylene has been studied using the Molecular Electron Density Theory (MEDT) through Density Functional Theory (DFT) calculations at the B3LYP/6-31G(d) level. The electronic structure of the reagents has been characterized through the electron localization function (ELF) and the conceptual DFT (CDFT). The DA reaction of hexachlorocyclopentadiene with 1,2-dichloroethylene proceeds via a synchronous or low asynchronous one-step mechanism. Based on the conducted research, a two-step mechanism with a biradical intermediate was completely ruled out. Bonding Evolution Theory (BET) study of the DA reaction shows that this reaction is topologically characterized by nine different phases. The reaction begins with the rupture of the double bonds in substrate molecules. Formation of the first CC single bond takes place in phase VII, while the second CC single bond takes place in phase IX. Formation of these two single bonds takes place by sharing the nonbonding electron densities of the two pairs of pseudoradical centers. In addition, this study evaluates some ligands as potential HIV-1 inhibitors. Docking results identified 5 and 5-F as the most promising candidates, surpassing AZT in theoretical affinity. ADME analysis revealed limitations in solubility and absorption for compounds 3, 4, and 5, while 5-F showed better solubility but low absorption. Toxicity concerns around 5-F suggest the need for risk management, while the other compounds require further safety assessment.
已运用分子电子密度理论(MEDT),通过在B3LYP/6 - 31G(d)水平的密度泛函理论(DFT)计算,研究了六氯环戊二烯与1,2 - 二氯乙烯之间的狄尔斯 - 阿尔德(DA)反应。通过电子定域函数(ELF)和概念密度泛函理论(CDFT)对反应物的电子结构进行了表征。六氯环戊二烯与1,2 - 二氯乙烯的DA反应通过同步或低异步的一步机理进行。基于所开展的研究,完全排除了具有双自由基中间体的两步机理。对DA反应的键演化理论(BET)研究表明,该反应在拓扑结构上具有九个不同阶段。反应始于底物分子中双键的断裂。第一个CC单键在阶段VII形成,而第二个CC单键在阶段IX形成。这两个单键的形成是通过共享两对假自由基中心的非键电子密度实现的。此外,本研究评估了一些配体作为潜在的HIV - 1抑制剂。对接结果确定5和5 - F为最有前景的候选物,在理论亲和力方面超过了齐多夫定。ADME分析揭示了化合物3、4和5在溶解度和吸收方面的局限性,而5 - F显示出较好的溶解度但吸收较低。对5 - F的毒性担忧表明需要进行风险管理,而其他化合物则需要进一步的安全性评估。