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血管性埃勒斯-当洛综合征家系中一个新的COL3A1基因重复的鉴定与结构特征分析

Identification and Structural Characterization of a Novel COL3A1 Gene Duplication in a Family With Vascular Ehlers-Danlos Syndrome.

作者信息

Miolo Gianmaria, Machin Piernicola, De Conto Marco, Fortuna Sara, Viglio Simona, Della Puppa Lara, Geremia Silvano, Corona Giuseppe

机构信息

Medical Oncology and Cancer Prevention Unit, Centro di Riferimento Oncologico di Aviano (CRO), IRCCS, Aviano, Italy.

Pathology Unit, Department of Medicine Laboratory Section, Pordenone Hospital, Pordenone, Italy.

出版信息

Mol Genet Genomic Med. 2025 Apr;13(4):e70095. doi: 10.1002/mgg3.70095.

DOI:10.1002/mgg3.70095
PMID:40219677
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11992433/
Abstract

BACKGROUND

Vascular Ehlers-Danlos syndrome (vEDS) is caused by alterations in the COL3A1 gene, typically involving missense variants that replace glycine residues. In contrast, short in-frame insertions, deletions, and duplications are rare and pose significant challenges for investigation.

METHODS

The histological examination of vascular tissue from a 26-year-old man, who died from a common iliac artery aneurysm and whose mother died at age 60 from an abdominal aortic dissection, strongly suggested a diagnosis of Ehler-Danlos type IV. Ex vivo collagen phenotype assessment, molecular analysis, and in silico structural studies of type III collagen were subsequently performed.

RESULTS

Ex vivo analysis of the patient's fibroblasts revealed altered collagen synthesis, whereas the molecular testing identified a novel 18-nucleotide in-frame duplication (c.2868_2885dup-GGGTCTTGCAGGACCACC) in the COL3A1 gene, resulting in a six-amino acid insertion, p.(Leu958_Gly963dup). Structural investigation indicated that this duplication led to a local perturbation of the collagen triple helix near a metalloproteinase cleavage site.

CONCLUSION

This study highlights the pathogenic role of a novel in-frame duplication in the COL3A1 gene, demonstrating how this seemingly benign alteration significantly compromises collagen turnover and contributes to the development of vEDS.

摘要

背景

血管型埃勒斯-当洛综合征(vEDS)由COL3A1基因改变引起,通常涉及取代甘氨酸残基的错义变异。相比之下,框内短插入、缺失和重复很少见,给研究带来重大挑战。

方法

对一名26岁男性的血管组织进行组织学检查,该男性死于髂总动脉瘤,其母亲60岁时死于腹主动脉夹层,强烈提示诊断为IV型埃勒斯-当洛综合征。随后对III型胶原蛋白进行了体外胶原蛋白表型评估、分子分析和计算机结构研究。

结果

对患者成纤维细胞的体外分析显示胶原蛋白合成改变,而分子检测在COL3A1基因中发现了一个新的18核苷酸框内重复(c.2868_2885dup-GGGTCTTGCAGGACCACC),导致六个氨基酸插入,即p.(Leu958_Gly963dup)。结构研究表明,这种重复导致金属蛋白酶切割位点附近的胶原蛋白三螺旋局部扰动。

结论

本研究强调了COL3A1基因中一种新的框内重复的致病作用,证明了这种看似良性的改变如何显著损害胶原蛋白周转并导致vEDS的发生。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/84d4d0afe72a/MGG3-13-e70095-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/530d2724c9d3/MGG3-13-e70095-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/1d6967a23bee/MGG3-13-e70095-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/5c98a65f815d/MGG3-13-e70095-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/5dcfe4047757/MGG3-13-e70095-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/84d4d0afe72a/MGG3-13-e70095-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/530d2724c9d3/MGG3-13-e70095-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/1d6967a23bee/MGG3-13-e70095-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/5c98a65f815d/MGG3-13-e70095-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/5dcfe4047757/MGG3-13-e70095-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff0b/11992433/84d4d0afe72a/MGG3-13-e70095-g006.jpg

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本文引用的文献

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Front Genet. 2022 Nov 18;13:1017446. doi: 10.3389/fgene.2022.1017446. eCollection 2022.
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On Quality Thresholds for the Clustering of Molecular Structures.关于分子结构聚类的质量阈值。
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Nonsyndromic arteriopathy and aortopathy and vascular Ehlers-Danlos syndrome causing COL3A1 variants.
非综合征性动脉病和主动脉病及血管型埃勒斯-当洛斯综合征导致的 COL3A1 变异。
Am J Med Genet A. 2022 Sep;188(9):2777-2782. doi: 10.1002/ajmg.a.62774. Epub 2022 May 11.
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Four decades in the making: Collagen III and mechanisms of vascular Ehlers Danlos Syndrome.四十年磨一剑:Ⅲ型胶原蛋白与血管型埃勒斯-当洛综合征的发病机制
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gmx_MMPBSA: A New Tool to Perform End-State Free Energy Calculations with GROMACS.gmx_MMPBSA:一种使用GROMACS进行终态自由能计算的新工具。
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