Román-Escrivá Pablo, Bernabeu Moisès, Paganin Eleonora, Díaz-Villanueva Wladimiro, Verdú Miguel, Oliver José L, Arnau Vicente, Moya Andrés
Institute for Integrative Systems Biology (I2SysBio), Spanish National Research Council (CSIC), University of València, 46980 València, Spain.
Barcelona Supercomputing Center (BSC), 08034 Barcelona, Spain.
Biology (Basel). 2025 Mar 25;14(4):338. doi: 10.3390/biology14040338.
Endosymbiosis can be considered a regressive or degenerative evolutionary process characterized at the genomic level by genome erosion and degeneration due to high mutational pressure toward AT (adenine and thymine) bases. The genomic and biological complexity of endosymbionts must be lower than that of the free-living bacteria from which they evolved. In the present work, we contrasted whether two proposed metrics for measuring genomic complexity in both types of bacteria, and , reflect their complexity, expecting higher values in free-living bacteria than in endosymbionts. On the other hand, we endeavored to delve into the factors that contribute to the reduction in metric values in endosymbionts, as well as their eventual relationship with six genomic parameters associated with functionality. This study aimed to test the robustness of these proposed metrics in a well-known biological scenario, such as the endosymbiosis process.
内共生可以被视为一个退化或逆向的进化过程,在基因组水平上的特征是由于对AT(腺嘌呤和胸腺嘧啶)碱基的高突变压力导致基因组侵蚀和退化。内共生体的基因组和生物学复杂性必须低于它们所进化而来的自由生活细菌。在本研究中,我们对比了两种用于衡量这两类细菌基因组复杂性的指标,即 和 ,是否反映了它们的复杂性,预计自由生活细菌中的值会高于内共生体。另一方面,我们努力探究导致内共生体中指标值降低的因素,以及它们最终与六个与功能相关的基因组参数之间的关系。本研究旨在测试这些提出的指标在一个著名的生物学场景,如内共生过程中的稳健性。