Li Shuangyu, Liu Xinshuai, Zhao Haoyu, Zhang Yuhua, Lu Zheng, Wang Juan, Li Ruichao, Xie Peng, Hu Yibin, Zhou Caiyuan, Mao Qian, Sun Leilei, Li Shanshan, Wang Wenhui, Wang Fang, Liu Xinyu, Liu Tiantian, Pan Wei, Wang Chengbao
College of Veterinary Medicine Northwest A&F University, Yangling 712100, Shaanxi, China.
DSM (Netherlands), Heerlen 6411, Netherlands.
Transbound Emerg Dis. 2024 Oct 1;2024:1828830. doi: 10.1155/2024/1828830. eCollection 2024.
Extended-spectrum -lactamase-producing (ESBL-EC) strains present a significant menace to the well-being of both animals and humans. However, limited information is available regarding their profiles in pigeons. Using a combination of whole genome sequencing, drug susceptibility testing, and bioinformatics analysis, we examined the genomic features and epidemiology of 95 ESBL-EC strains (41 racing and 54 meat pigeons) that were isolated from 11 Chinese cities. These strains belonged to seven phylogenetic groups (A, B1, B2, C, D, E, and F). Moreover, these isolates have 51 serotypes, including several pathogenic ones (e.g., O51, O8, O4, O25, and O6). Notably, two high-risk clones, ST131 O25:H4, were found in racing pigeons and were responsible for the worldwide outbreaks of highly pathogenic and multidrug-resistant (MDR) infections. In addition, we found 41 multilocus sequence typing types, of which the dominant types were ST155, ST20, ST1011, and ST1196. In total, 91 isolates (95.79%) showed MDR, while eight isolates (8.42%) showed resistance to up to eight classes of antibiotics. Furthermore, we identified a series of ESBL genes in these isolates, including , , , , and . Also, 50 other antibiotic resistance genes (ARGs) were accompanied by the carriage of 33 plasmid replicon types, facilitating the horizontal spread of ARGs. Interestingly, three , four , and one (X4) were found in isolates of meat pigeons, and it was possible to successfully transfer the plasmids containing (X4) and to C600. In summary, this work presents the complexity of MDR profiles, plasmid profiles, and multiple typing profiles of Chinese ESBL-EC isolates of pigeon origin for the first time. The thorough investigation of ESBL-EC in pigeons presented in this work suggests that racing and meat pigeons are significant ARGs reservoirs.
产超广谱β-内酰胺酶(ESBL-EC)菌株对动物和人类的健康构成了重大威胁。然而,关于其在鸽子中的情况的信息有限。我们结合全基因组测序、药敏试验和生物信息学分析,研究了从中国11个城市分离出的95株ESBL-EC菌株(41株赛鸽和54株肉鸽)的基因组特征和流行病学情况。这些菌株属于7个系统发育群(A、B1、B2、C、D、E和F)。此外,这些分离株有51种血清型,包括几种致病血清型(如O51、O8、O4、O25和O6)。值得注意的是,在赛鸽中发现了两个高危克隆ST131 O25:H4,它们导致了全球高致病性和多重耐药(MDR)感染的爆发。此外,我们发现了41种多位点序列分型类型,其中优势类型为ST155、ST20、ST1011和ST1196。总共91株分离株(95.79%)表现出多重耐药,而8株分离株(8.42%)对多达八类抗生素耐药。此外,我们在这些分离株中鉴定出一系列ESBL基因,包括 、 、 、 和 。此外,50个其他抗生素耐药基因(ARGs)伴随着33种质粒复制子类型的携带,促进了ARGs的水平传播。有趣的是,在肉鸽分离株中发现了三个 、四个 和一个(X4),并且有可能成功地将含有(X4)和 的质粒转移到C600中。总之,这项工作首次展示了中国鸽子源ESBL-EC分离株多重耐药谱、质粒谱和多种分型谱的复杂性。这项工作中对鸽子中ESBL-EC的深入研究表明,赛鸽和肉鸽是重要的ARGs储存库。