Feng Jing, Li Xueshan, Teng Xin, Fan Dingding, Yin Jin, Qiu Yanci, Yi Ziling, Chen Li, Zhang Haoqian M, Rao Chitong
Bluepha Co. Ltd., Shanghai, China.
Shanghai Key Laboratory of Metabolic Remodeling and Health, Institute of Metabolism & Integrative Biology, Fudan University, Shanghai, China.
Metab Eng. 2025 Sep;91:204-216. doi: 10.1016/j.ymben.2025.04.009. Epub 2025 May 1.
Palm oil is an attractive feedstock for bioproduction due to its high carbon content and low cost. However, its metabolism generates excess reducing power, leading to redox imbalances and reduced metabolic efficiency in industrial fermentations. Through a model-driven approach integrating flux balance analysis, we activated the Calvin-Benson-Bassham (CBB) cycle in Cupriavidus necator to recycle surplus reducing power and restore metabolic balance in polyhydroxyalkanoate (PHA) bioproduction. Computational simulations predicted that constitutive activation of the CBB cycle enhanced CO fixation and accelerated biomass generation when utilizing palm oil as the carbon source. Model-guided optimization revealed that precise tuning of CBB activation strength was critical, as both insufficient and excessive activation led to metabolic inefficiencies. At the 2-liter bench-scale, CBB activation tuning resulted in biomass changes ranging from -18 % to 21 % and PHA yield changes ranging from -36 % to 25 %. Mechanistic studies demonstrated that CBB activation improves metabolic efficiency through reducing power recycling and carbon redistribution. In the 15 m industrial-scale fermentations, the engineered strain achieved a 20 % higher PHA yield. These results demonstrate that recycling surplus reducing power is a scalable and robust strategy for enhanced bioproduction efficiency.
由于碳含量高且成本低,棕榈油是生物生产中一种有吸引力的原料。然而,其代谢会产生过量的还原力,导致氧化还原失衡,并降低工业发酵中的代谢效率。通过整合通量平衡分析的模型驱动方法,我们在食酸铜绿假单胞菌中激活了卡尔文-本森-巴斯姆(CBB)循环,以回收多余的还原力,并在聚羟基脂肪酸酯(PHA)生物生产中恢复代谢平衡。计算模拟预测,当以棕榈油作为碳源时,CBB循环的组成型激活可增强CO固定并加速生物质生成。模型指导的优化表明,精确调整CBB激活强度至关重要,因为激活不足和过度都会导致代谢效率低下。在2升的实验室规模下,CBB激活调整导致生物质变化范围为-18%至21%,PHA产量变化范围为-36%至25%。机理研究表明,CBB激活通过还原力回收和碳重新分配提高了代谢效率。在15立方米的工业规模发酵中,工程菌株的PHA产量提高了20%。这些结果表明,回收多余的还原力是提高生物生产效率的一种可扩展且稳健的策略。